DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camk2d

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_017952440.2 Gene:camk2d / 100135023 XenbaseID:XB-GENE-868293 Length:537 Species:Xenopus tropicalis


Alignment Length:555 Identity:390/555 - (70%)
Similarity:439/555 - (79%) Gaps:59/555 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 APAACTRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRK 67
            |...||||:|.|.:.|||||||||:|:||::.:||.|:||||||||||:|||.|||||||||||.
 Frog     2 ASTTCTRFTDEYQLFEELGKGAFSVVRRCMKITTGQEYAAKIINTKKLSARDHQKLEREARICRL 66

  Fly    68 LHHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGV 132
            |.|||||||||||.||.:|||||||||||||||||||||:|||||||||||||||||||||.||:
 Frog    67 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGI 131

  Fly   133 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDI 197
            |||||||||||||||.|||||||||||||||||||.||||||||||||||||||:|:||||.||:
 Frog   132 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDM 196

  Fly   198 WACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRIT 262
            ||||||||||||||||||||||||||.||||||||:|||||||||||||:|||:|||:||.||||
 Frog   197 WACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT 261

  Fly   263 AAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGS 327
            |||||:|||||||..|||::|||||||||||||||||||||||||||||||||:...:.||.:|.
 Frog   262 AAEALRHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAKSLLKKPDGV 326

  Fly   328 QV-------------------------------KESTDSSSTTLEDDDIKEDKKGTVDRSTTVVS 361
            ::                               ||||:||:||:||:|:|..|            
 Frog   327 KINNKANVITSPKDPTPPLEPQSTVIHNPADGNKESTESSNTTIEDEDVKATK------------ 379

  Fly   362 KEPEDIRILCPAKTYQQN-------IGNSQCSSAARRQEIIKITEQLIEAINSGDFDGYTKICDP 419
                     |...||.:.       ..||..|..:|:|||||:|||||||||:|||:.|||||||
 Frog   380 ---------CTENTYSKTHLHESEPSRNSSSSVQSRKQEIIKVTEQLIEAINNGDFEAYTKICDP 435

  Fly   420 HLTAFEPEALGNLVEGIDFHKFYFENVLGKNCKAINTTILNPHVHLLGEEAACIAYVRLTQYIDK 484
            .||:||||||||||||:|||:|||||.|.|:.|.::|.||||||||:||:||||||:|||||:|.
 Frog   436 GLTSFEPEALGNLVEGMDFHRFYFENALSKSNKPVHTIILNPHVHLIGEDAACIAYIRLTQYLDS 500

  Fly   485 QGHAHTHQSEETRVWHKRDNKWQNVHFHRSASAKI 519
            .|...|.|||||||||:||.||||||||||.|..|
 Frog   501 TGMPKTMQSEETRVWHRRDGKWQNVHFHRSGSPTI 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 251/290 (87%)
S_TKc 14..272 CDD:214567 223/257 (87%)
CaMKII_AD 390..517 CDD:285524 96/126 (76%)
camk2dXP_017952440.2 STKc_CaMKII 11..302 CDD:270988 251/290 (87%)
CaMKII_AD 406..533 CDD:285524 96/126 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 476 1.000 Domainoid score I431
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55561
Inparanoid 1 1.050 783 1.000 Inparanoid score I516
OMA 1 1.010 - - QHG52374
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 1 1.000 - - FOG0000706
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3212
SonicParanoid 1 1.000 - - X46
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.110

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