Sequence 1: | NP_001259085.1 | Gene: | apolpp / 43827 | FlyBaseID: | FBgn0087002 | Length: | 3351 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033823.2 | Gene: | Apob / 238055 | MGIID: | 88052 | Length: | 4505 | Species: | Mus musculus |
Alignment Length: | 4034 | Identity: | 773/4034 - (19%) |
---|---|---|---|
Similarity: | 1369/4034 - (33%) | Gaps: | 1339/4034 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 NLGCPKSDNGLLKYIPGNYYDYSFDSILTIGASSDVPNDSDDTS-LKVSGSAKIFAKGNCGYTLQ 93
Fly 94 -----LSSVKVTNTK-ESVEKKILNS-------IQKPVQFTLVSG---ILEPQICSDSSDLDYSL 142
Fly 143 NIKRAVVSLLQSGIEAEHEVD------VFGMCPTH-TSTSKVGNA-NIITKARNLNSCSHREQIN 199
Fly 200 S-----GLVSGKVNEKAGITSS------------------------LLLQANYIKESRIVNHLIE 235
Fly 236 NVQLTETYKF---------------IGNTKRNS---DISAKVVTILKLKNPSGTKANSPG----- 277
Fly 278 ---------TGSTVRSLIFQRPETYTSKNINALKTILSDLVDSTGDYVKKETAKKFVEFIRLLRQ 333
Fly 334 SDSETLLE------LAAFPHPNKVLARKVYLDGLFRTSTAESARVILKQLSKFDEKEKLLAILSL 392
Fly 393 NIVKSVDKETLNQAASQLLPNAPKELYIAVGNLVAKYCLK---NYCQGPEIDAISKKFSDGLKHC 454
Fly 455 KPNTKREEERIVYILKGLGNAKSLSGNTV---------AALSECASTGRSNRIRVAALHAFSKVK 510
Fly 511 CEETLQSKSLELLKNRNEDSELRIEAYLSAISCPNAEVANQISEIVNSETVNQVGGFISSNLKAI 575
Fly 576 RDSTDVSRDQQKYHLANIRVTKTFP--VDYRRYSFNNEVSYKLESL----GVGASTDYQIIYSQH 634
Fly 635 GFLPRSSRINVTTEFFG-TNYNVFEASVRQENVEDVLEYYLGPKGL----VNKDF--------DE 686
Fly 687 IVKLIEVGNNGVAAGGRARRSIVDDVSKISKKYKMYGVKNVQDLNLDVS---LKLFGSELAFLSL 748
Fly 749 GD----------------NIPSSLDDIINYFSTSFEKAKQELSSFEKQFSSHHLFLDTDLAYPTS 797
Fly 798 IGVPLELVAQGFAATKVDLAVSLDINAILEQNWQKAKYRLKFV------------PSVDINANV- 849
Fly 850 -QIGFNAQV-LSTG-LRVVSSAHSATGSDITVAVISDGEGFNVDLELPREKLELINFNVDTELYV 911
Fly 912 AEQDKQKAIALKGNKKNKNSQPSEICFNQLELVGLNICIKSSTSLSEVQAGNGNVAERGLSVSEK 976
Fly 977 FHLSRPFNFAVY--LTTERKFTFKGIHTQEAFSQKWKLDYSTPGSKVSHDTTVVYELGNKPKTFS 1039
Fly 1040 RLSFDNSQCHFAVEGGINNDKNELVVYGQYEQDKEIKKSKI---GF--------------SKNGN 1087
Fly 1088 EYKPLIEIQDNNGISNSINGY-----HADGKIVVKKNSNNIERYNFEN--------------FQV 1133
Fly 1134 SNSNNAHVAV------------------NGWSDVGTNSLTSELRISLDHQTFLIKENLKLENGLY 1180
Fly 1181 EAGFFINDEHSPE-----NIYGSSIHLTIADQSY-ALKTNGKAAAWSIGSDGSFNFQKLADSNSA 1239
Fly 1240 RAG----SLVENVEIQYKNKQVGGIKIMSNFDVNKMDVDVEI------SREQKIGSII----VKY 1290
Fly 1291 ESNQRHAQDYSLEASA----KINKHSIDVISKCDFNGNVYVVDNSLVTSWGTLLSAKGEIGQRYS 1351
Fly 1352 AQ-----------DI-NINIQGNVQISGKDKVTQWILKVIGTPDK--TNSDFRISR----DTSEL 1398
Fly 1399 IK-----LTSESQHPQDKI-----SFAKLNLIVKNQLTAKGEFRVAK---NGKGDFTASIDTLKT 1450
Fly 1451 EPKHKLEIESKFHIQSPKYD---------IDASLTL-------DG--KRKVHLKSENTIEKLKFS 1497
Fly 1498 T----KNIGEANDKIIAF-----------EAN-----------GSLKGE-LRGNGEIQGTFIFN- 1534
Fly 1535 ---------APDGRVIDGSINRKIS-------TNAKSGLSQGNIDAQLSDTPFGSNKKRSISLIG 1583
Fly 1584 KLDRLNTKTKEFSANSNLVYTAFNGEKSEISYQIKQQPNGDAKNI-DFSLKAYGNPLPQPFEIAF 1647
Fly 1648 ALGDYSAQHAV------VSITSKYGEIFSVSANGNYNNNQALE-------------YGLQANIEI 1693
Fly 1694 PKSTLKSLEINSHGKVLKSLIGNE-NAAYNVEFFLDSKTSLGQYARVNTVWNGTANDGSY----D 1753
Fly 1754 FEAQTNNME-------SPLKFNGKYHRK--------QTGNIKDGDLT--GKQT------YVLNAQ 1795
Fly 1796 YGAQYVKMDASLGYGAEKVDIAYVIDSSFDSVKDIKVNIRTFKPLDDSTYVVTALFKQTDKSYGL 1860
Fly 1861 DTTFYHSAHKKGVD-------------IRLDLLKEKPIIISSIAELLGDRKGKVLFEILNLADLD 1912
Fly 1913 IKINSEASYVSID---EFYIIV------NWSSKKLKLDGYELEARAQSKNIKIQL-KNENGIIFS 1967
Fly 1968 GTATYALKKELNKTIIDGQGKVQYQGKALSGNFKLTRQ--HFDFGTD--REVGFSYTFMGNLGSK 2028
Fly 2029 NGLGTLKITNKEFNTKFSVCEEKRQCTNLIVQSIVSIDEQKLDAVEHTTLIIVDLRDFGYPYEFE 2093
Fly 2094 LKSQNTRQGLK------------------YQYHLDSFIITGNNFKYQFTANVQPTSSTIKLALPK 2140
Fly 2141 RQILFETTQKIPADGSLFGRYEQTASFFIDKLQKPDDVARFSAIVDVTGTERVAFNANGKLKFEH 2205
Fly 2206 PTIRPLSISGQLNGDVNQQIASAEVIFDIFRLPE----QKVVGNSELRNSRSQNGFNIAYITTVK 2266
Fly 2267 SAGLQFQYQINSNAAVDIEAHEYNIGLELNNGEIDVKAISFLNKEKFEISLSESNKHIIYIVGDF 2331
Fly 2332 SKQNHYAKLNTKVQILDKNPIEITSEVQPNSAKIILKRQDFIDGTAEVKLGKEFK---------V 2387
Fly 2388 DVIGSGKQLFNGRVALDATNFLQTNYFINEDHLNGFWHIVESEINKDSEYISENIKERLKKSRQV 2452
Fly 2453 TDKIVKLAKEAGPDFSKLQGKLLDYKNDIVQELEADQSIAPIIDGIRTLFKKIAGIVDDINKAIS 2517
Fly 2518 EILEKAQKSIVDIYDKLQALWKDSLLKAWEDFIITVQKLISTLKTEFIKICTQSFKDLLSALEKY 2582
Fly 2583 GPALKNYGKAIGEIVKPINDAAQEVIKIVVNAAEG-VTHEFKQYVASLPSFE-SIR----NEFND 2641
Fly 2642 KVKVLKLFEKATELTNSLFDQI-NI-LPQTPETSEFLQ----KLHDYLIAKLKQEHIDNEKYIEE 2700
Fly 2701 LGQLLIKAVRSIW------------VSI---RSTYP-----------------GSSD------HV 2727
Fly 2728 IDFQSWIGSLTHSFD--SLAVLPSILSFRSSILNCLLNENWDVVFNKKLLYSWIFFNDFELRGHV 2790
Fly 2791 VDGKHIFTFDGLNFAYPGNCKYI-------LAQDSV-----------DNNFTIIGQLTNGKLKSI 2837
Fly 2838 TLIDREGSYFEVADNLALKLNGNL-----VEYPQHLS---------------------------- 2869
Fly 2870 -----------------GLHAWRRFYTI----------------HL--------------YSEYG 2887
Fly 2888 VGIVCTSDLKVCHININGFYTSKTRGLLGNGNAEPYDDFLL-----IDGTLAENS---------- 2937
Fly 2938 AALGNDYG---VG---KCTA-IEFDN---------------------NQFKSSKRQEMCSELFGI 2974
Fly 2975 ESTLAFN------FITLD------SRPY--------------------------RKACDIALAKV 3001
Fly 3002 AEK--EKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEFTVKLPNN------- 3057
Fly 3058 -------KVD--------------------VVFVVDINVTPGVLS-------------------- 3075
Fly 3076 --NLIAPAINDIRESLR-----------------SRGFSDVQVGVIVFEETKRYPAL--LTSDGG 3119
Fly 3120 KINYKGNVADVKL-AGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQADEKAFQLA----L 3179
Fly 3180 DYPFRAGAAKSIIGVRSDSLEYKNWWKFVRAQLTGSITKFDGALIHLIAPVKGLSLEGVLS---- 3240
Fly 3241 ---------EKLIGFN-SRLVATVDGKDSKKRTKLQFDNDMGID--FVLNNGGWVFATQNFEK-- 3291
Fly 3292 LKAS 3295 |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I11194 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4338 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 1 | Normalized mean entropy | S10273 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm43226 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |