DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and Bmp7

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001178785.1 Gene:Bmp7 / 85272 RGDID:620743 Length:430 Species:Rattus norvegicus


Alignment Length:559 Identity:124/559 - (22%)
Similarity:189/559 - (33%) Gaps:198/559 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 RSERDPSHHKY----------RSPF-DFTFNISKNNVYGKVL--RNRSLERIDKKNSFLNGWTEN 503
            ||.|..:.|.:          ||.. ||:.:   |.|:...:  |.||.||.:.:...|:     
  Rat     4 RSLRAAAPHSFVALWAPLFLLRSALADFSLD---NEVHSSFIHRRLRSQERREMQREILS----- 60

  Fly   504 RQLKINSQIASMPIELKSH----HNSSPK---ELKSGAVRKVNGINGTQMNENALKKSTYPIDIN 561
                    |..:|...:.|    |||:|.   :|.:....:.:|.:|        :..:||....
  Rat    61 --------ILGLPHRPRPHLQGKHNSAPMFMLDLYNAMAVEESGPDG--------QGFSYPYKAV 109

  Fly   562 HSIDNKTHTGKNGEMSHNDYEYFND-------YSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQK 619
            .|.......      |..|..:..|       .::..|||..:|                   .:
  Rat   110 FSTQGPPLA------SLQDSHFLTDADMVMSFVNLVEHDKEFFH-------------------PR 149

  Fly   620 GHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYR--ILEFSAQNRRVPSQKLSIRSAQIH 682
            .||..|..|...|..       .|.:|.||    :|.|:  |.|      |..::...|...|: 
  Rat   150 YHHREFRFDLSKIPE-------GEAVTAAE----FRIYKDYIRE------RFDNETFQITVYQV- 196

  Fly   683 IRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFRAS 747
                     ..|.:....:..||:::..|.:.:                                
  Rat   197 ---------LQEHSGRESDLFLLDSRTIWASEE-------------------------------- 220

  Fly   748 FQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSDYLSTN 812
                    ||..||:|.|...|..:..| .|.|.:......|: |::    .||.|....:...|
  Rat   221 --------GWLVFDITATSNHWVVNPRH-NLGLQLSVETLDGQ-SIN----PKLAGLIGRHGPQN 271

  Fly   813 PNRPFLV-------LHTESSRTRRVRRRAVDCGGALNGQ-------------------CCKESFY 851
             .:||:|       :|..|.|:...::|:.:.......|                   |.|...|
  Rat   272 -KQPFMVAFFKATEVHLRSIRSTGGKQRSQNRSKTPKNQEALRMASVAENSSSDQRQACKKHELY 335

  Fly   852 VSFKALGWDDWIIAPRGYFANYCRGDCT---GSFRTPDTFQTFHA------HFIEEYRKMGLMNG 907
            |||:.|||.||||||.||.|.||.|:|.   .|:..    .|.||      |||..      ...
  Rat   336 VSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMN----ATNHAIVQTLVHFINP------DTV 390

  Fly   908 MRPCCAPIKFSSMSLIYYGD-DGIIKRDLPKMVVDECGC 945
            .:|||||.:.:::|::|:.| ..:|.:....|||..|||
  Rat   391 PKPCCAPTQLNAISVLYFDDSSNVILKKYRNMVVRACGC 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 42/109 (39%)
Bmp7NP_001178785.1 TGFb_propeptide 35..279 CDD:459906 67/363 (18%)
TGF_beta_BMP7 324..430 CDD:381667 44/116 (38%)

Return to query results.
Submit another query.