DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and Tgfb2

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_112393.2 Gene:Tgfb2 / 81809 RGDID:70491 Length:442 Species:Rattus norvegicus


Alignment Length:493 Identity:104/493 - (21%)
Similarity:170/493 - (34%) Gaps:150/493 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 QLKINS------QIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENALKKSTYPIDINHS 563
            :||:.|      :...:|.|:.|.:||:...|:..|.|:.......:.:|....|..|.||:...
  Rat    47 KLKLTSPPEDYPEPDEVPPEVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPSH 111

  Fly   564 IDNK-------THTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGH 621
            ..::       |.:|..|....                   .:.:...||..||           
  Rat   112 FPSETVCPVVTTSSGSVGSFCS-------------------RQSQVLCGYLDAI----------- 146

  Fly   622 HESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQY-RILEFSAQNRRVPSQKLSIRSAQIHI-R 684
                                        ..|.||.| ||:.|........:..|.  .|:..: |
  Rat   147 ----------------------------PPTFYRPYFRIVRFDVSTMEKNASNLV--KAEFRVFR 181

  Fly   685 IDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINI---TEKGID-KAIIFR 745
            :..|.:...|:                         :|.::|:..|.::   |::.|| |.:..|
  Rat   182 LQNPKARVAEQ-------------------------RIELYQILKSKDLTSPTQRYIDSKVVKTR 221

  Fly   746 ASFQVDPKNLGWQKFDLTDTIREWYGHTSHE-KLRLLIDCTGC----GGRYSL-HLFQTSKLR-- 802
            |..:       |..||:||.:.||..|.... ..::.:.|..|    ...|.: :..|..:.|  
  Rat   222 AEGE-------WLSFDVTDAVHEWLHHKDRNLGFKISLHCPCCTFIPSNNYIIPNKSQELEARFA 279

  Fly   803 --GNSSDYLS------------TNPNRPFLVL------HTESSRTRRVRRRAVD---CGGALNGQ 844
              ..:|.|.|            ::...|.|:|      ..||.::.|.|:||:|   |...:...
  Rat   280 GIDGTSTYASGDQKTIKSTRKKSSGKTPHLLLMLLPSYRLESQQSSRRRKRALDAAYCFRNVQDN 344

  Fly   845 CCKESFYVSFKA-LGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGM 908
            ||....|:.||. ||| .||..|:||.||:|.|.|...:.:    .|.|...:..|..:......
  Rat   345 CCLRPLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWSS----DTQHTKVLSLYNTINPEASA 404

  Fly   909 RPCCAPIKFSSMSLIYY-GDDGIIKRDLPKMVVDECGC 945
            .|||.......::::|| |:...|:: |..|:|..|.|
  Rat   405 SPCCVSQDLEPLTILYYIGNTPKIEQ-LSNMIVKSCKC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 32/101 (32%)
Tgfb2NP_112393.2 TGFb_propeptide 21..256 CDD:459906 53/300 (18%)
TGF_beta_TGFB2 345..441 CDD:381655 32/101 (32%)

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