DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and bmp3

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001071233.1 Gene:bmp3 / 777717 ZFINID:ZDB-GENE-030131-7192 Length:452 Species:Danio rerio


Alignment Length:492 Identity:102/492 - (20%)
Similarity:165/492 - (33%) Gaps:170/492 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   519 LKSHHNSSPKELKSG-AVRKVNGINGTQMNENALKKSTYPIDINHSIDNKTHTGKNGE-MSHNDY 581
            |.:.:.|:...||.| .||...|..|| :|...|:           |.|.|...|:.: :|...:
Zfish    65 LYAKYTSAGFPLKDGNTVRSFKGHLGT-INNRQLQ-----------IFNLTSLTKSEDVLSATLH 117

  Fly   582 EYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGHHESFADDHENID------------- 633
            .|..|....:|        |.|.....|.||:..:           .|.::|             
Zfish   118 YYIGDLHNSSH--------RCSKHKSCAQHNLRRQ-----------AHVHLDVWSFSLVKNTTRT 163

  Fly   634 -----------HEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNR-RVPSQK-LSIRSAQIHI-- 683
                       |.||.....:.||......::....::..:..:| ..|.:| ||.||..|.:  
Zfish   164 IGHFPINISTMHWDFISWQWKDITRVVNQAKHHDQLLIGININSRGHQPWKKLLSDRSPYILVYA 228

  Fly   684 ---RIDKPHS----LWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKA 741
               .|.:|.|    |...|::.||..|:|.:         |:|                      
Zfish   229 NDSAISEPESVVSTLQRHKSRLLPNLHMLES---------HNR---------------------- 262

  Fly   742 IIFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSS 806
               .||.|                      |.|.....:|:.            .|.::|.|...
Zfish   263 ---NASAQ----------------------HRSRRSTNILLP------------LQNNELPGPEY 290

  Fly   807 DY-LST------------------------NPNRPFLVLHTESSRTRRVRRRAVDCGGALNGQCC 846
            .| :.|                        ||.....:|..:....::.|::..:    ....|.
Zfish   291 PYEIPTWDEASPYDPMESKTVKRPRKKPRKNPRHKNPLLQFDEQTIKKARKKQWN----EPRNCA 351

  Fly   847 KESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQ-TFHAHFIEEYRKMGLMNGM-R 909
            :....|.|..:||.:|||:|:.:.|.||.|.|  .|..|.:.: :.||......|.:|::.|: .
Zfish   352 RRYLKVDFADIGWSEWIISPKSFDAYYCSGSC--QFPMPKSLKPSNHATIQSIVRAVGVVPGIPE 414

  Fly   910 PCCAPIKFSSMSLIYYGDD-GIIKRDLPKMVVDECGC 945
            |||.|.|.||:|::::.:| .::.:..|.|.||.|.|
Zfish   415 PCCVPEKMSSLSILFFDEDKNVVLKVYPNMTVDSCAC 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 35/102 (34%)
bmp3NP_001071233.1 TGF_beta_BMP3 343..452 CDD:381663 36/115 (31%)

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