DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and TGFB2

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001129071.1 Gene:TGFB2 / 7042 HGNCID:11768 Length:442 Species:Homo sapiens


Alignment Length:505 Identity:112/505 - (22%)
Similarity:174/505 - (34%) Gaps:174/505 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 QLKINS------QIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENALKKSTYPIDINHS 563
            :||:.|      :...:|.|:.|.:||:...|:..|.|:.......:.:|....|..|.||:...
Human    47 KLKLTSPPEDYPEPEEVPPEVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPPF 111

  Fly   564 IDNK-------THTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGH 621
            ..::       |.:|..|.:..                   .:.:...||..||           
Human   112 FPSETVCPVVTTPSGSVGSLCS-------------------RQSQVLCGYLDAI----------- 146

  Fly   622 HESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQY-RILEF--SAQNRRVPSQKLSIRSAQIHI 683
                                        ..|.||.| ||:.|  ||..:...    ::..|:..:
Human   147 ----------------------------PPTFYRPYFRIVRFDVSAMEKNAS----NLVKAEFRV 179

  Fly   684 -RIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINI---TEKGID-KAII 743
             |:..|.                       |..|..||::  :|:..|.::   |::.|| |.:.
Human   180 FRLQNPK-----------------------ARVPEQRIEL--YQILKSKDLTSPTQRYIDSKVVK 219

  Fly   744 FRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLH----LFQTS----- 799
            .||..:       |..||:||.:.||.    |.|.|.|      |.:.|||    .|..|     
Human   220 TRAEGE-------WLSFDVTDAVHEWL----HHKDRNL------GFKISLHCPCCTFVPSNNYII 267

  Fly   800 ---------KLRG--NSSDYLS------------TNPNRPFLVL------HTESSRTRRVRRRAV 835
                     :..|  .:|.|.|            .:...|.|:|      ..||.:|.|.::||:
Human   268 PNKSEELEARFAGIDGTSTYTSGDQKTIKSTRKKNSGKTPHLLLMLLPSYRLESQQTNRRKKRAL 332

  Fly   836 D---CGGALNGQCCKESFYVSFKA-LGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFI 896
            |   |...:...||....|:.||. ||| .||..|:||.||:|.|.|...:.:    .|.|:..:
Human   333 DAAYCFRNVQDNCCLRPLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWSS----DTQHSRVL 392

  Fly   897 EEYRKMGLMNGMRPCCAPIKFSSMSLIYY-GDDGIIKRDLPKMVVDECGC 945
            ..|..:.......|||.......::::|| |....|:: |..|:|..|.|
Human   393 SLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQ-LSNMIVKSCKC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078 2/3 (67%)
TGF_beta 843..945 CDD:278448 32/103 (31%)
TGFB2NP_001129071.1 TGFb_propeptide 21..256 CDD:395559 62/312 (20%)
TGF_beta_TGFB2 345..441 CDD:381655 32/101 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.870

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