Sequence 1: | NP_651942.2 | Gene: | Actbeta / 43826 | FlyBaseID: | FBgn0024913 | Length: | 946 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001016819.1 | Gene: | gdf1 / 549573 | XenbaseID: | XB-GENE-481419 | Length: | 361 | Species: | Xenopus tropicalis |
Alignment Length: | 267 | Identity: | 68/267 - (25%) |
---|---|---|---|
Similarity: | 107/267 - (40%) | Gaps: | 88/267 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 721 KIWVFQLSTSINITEKG-----IDKAIIFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRL 780
Fly 781 LI--------------DCTGCGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVLHT----ESSRT 827
Fly 828 RRVRRRAVDCGGALNGQCCKESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFH 892
Fly 893 AHFIEEYRKMGLMNGMR------------------PCCAPIKFSSMSLIYY-GDDGIIKRDLPKM 938
Fly 939 VVDECGC 945 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Actbeta | NP_651942.2 | TGFb_propeptide | 370..>509 | CDD:279078 | |
TGF_beta | 843..945 | CDD:278448 | 39/120 (33%) | ||
gdf1 | NP_001016819.1 | TGFb_propeptide | <108..205 | CDD:366248 | 15/67 (22%) |
TGF_beta_GDF1_3_like | 260..361 | CDD:381642 | 41/120 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |