DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and bmp2

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001015963.1 Gene:bmp2 / 548717 XenbaseID:XB-GENE-481829 Length:398 Species:Xenopus tropicalis


Alignment Length:475 Identity:100/475 - (21%)
Similarity:173/475 - (36%) Gaps:126/475 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 QLKINSQIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENALKKSTYPIDINHSIDNKTH 569
            |:.::.....:|.|.|..:..|.:.....:...:|......:|...||:...|            
 Frog    15 QILLSGCTGLIPEEGKRKYTESGRSSPQHSQSVLNQFELRLLNMFGLKRRPTP------------ 67

  Fly   570 TGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGHHESFADDHENIDH 634
             |||             ..:..:..:.||.....:........::|:.::.  .|.|:...:..|
 Frog    68 -GKN-------------IVIPPYMLDLYHLHSGQLAADQDSSPMDYQIERA--ASRANTVRSFHH 116

  Fly   635 EDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHI---RIDKPHSLWIEKA 696
            |:   :.:||   .|.|.:..|......|:    ||:::| :.||::.|   .:.:|..      
 Frog   117 EE---SMEEI---PESGEKTIQRFFFNLSS----VPNEEL-VTSAELRIFREGVQEPFE------ 164

  Fly   697 KSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKG-----IDKAIIFRASFQVDPKNLG 756
                           |.:...|||.|  :.:........:|     :|..:|.....:       
 Frog   165 ---------------GDSSKLHRINI--YDIVKPAAAASRGPVVRLLDTRLIHHNESK------- 205

  Fly   757 WQKFDLTDTIREWYGH--TSHEKLRLLIDCTGCGGRYSLHLFQTSKL--------RGNSSDYLST 811
            |:.||:|..|..|..|  .:|   ..:::.|        ||.....:        |....|..|.
 Frog   206 WESFDVTPAITRWIAHKQPNH---GFVVEVT--------HLDNDKNVPKKHVRISRSLVPDKDSW 259

  Fly   812 NPNRPFLV----------LHTESSRTRRVRRRAVDCGGALNGQCCKESFYVSFKALGWDDWIIAP 866
            ...||.||          ||....|..|.::|.     .|...|.:...||.|..:||:|||:||
 Frog   260 PRIRPLLVTFSHDGKGHALHKREKRQARHKQRK-----RLKSSCRRHPLYVDFSDVGWNDWIVAP 319

  Fly   867 RGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGMRP-----CCAPIKFSSMSLIYYG 926
            .||.|.||.|:|  .|...|...:.:...::.     |:|.:.|     ||.|.:.|::|::|..
 Frog   320 PGYHAFYCHGEC--PFPLADHLNSTNHAIVQT-----LVNNVNPNIPKACCVPTELSAISMLYLD 377

  Fly   927 D-DGIIKRDLPKMVVDECGC 945
            : :.::.::...|||:.|||
 Frog   378 ENEKVVLKNYQDMVVEGCGC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078 1/3 (33%)
TGF_beta 843..945 CDD:278448 33/107 (31%)
bmp2NP_001015963.1 TGFb_propeptide 34..269 CDD:366248 55/314 (18%)
TGF_beta_BMP2_like 298..398 CDD:381638 35/107 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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