DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and NODAL

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_060525.3 Gene:NODAL / 4838 HGNCID:7865 Length:347 Species:Homo sapiens


Alignment Length:326 Identity:75/326 - (23%)
Similarity:116/326 - (35%) Gaps:113/326 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   671 SQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITE 735
            ||:..:..|::.:::..|..|..|.:.::...|         ..||.                ||
Human    83 SQQEDLAWAELRLQLSSPVDLPTEGSLAIEIFH---------QPKPD----------------TE 122

  Fly   736 KGIDKAIIFRASFQVD---------PKNLGWQKFDLTDTIREWYGHT-SHEKLRLLIDCTGCGGR 790
            :..|..:   ..||:|         ..:||....::|..:.:|..|. :.||             
Human   123 QASDSCL---ERFQMDLFTVTLSQVTFSLGSMVLEVTRPLSKWLKHPGALEK------------- 171

  Fly   791 YSLHLFQTSKLRGNSSDYLSTNP-NRPFLVLHTESSRTRRVRRRAVDCGG------------ALN 842
                  |.|::.|.......|.| ....|:|::..|:.:|      ..||            |..
Human   172 ------QMSRVAGECWPRPPTPPATNVLLMLYSNLSQEQR------QLGGSTLLWEAESSWRAQE 224

  Fly   843 GQ--------------------CCKESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDT 887
            ||                    |.|..|.|.|..:||..|||.|:.|.|..|.|:|...  ..:.
Human   225 GQLSWEWGKRHRRHHLPDRSQLCRKVKFQVDFNLIGWGSWIIYPKQYNAYRCEGECPNP--VGEE 287

  Fly   888 FQ-TFHAHFIEEYRKMGLMNGMRP------CCAPIKFSSMSLIYYGDDGIIKRDLPK-MVVDECG 944
            |. |.||:.      ..|:...:|      ||||:|...:|::|. |:|.:..|..| |:|:|||
Human   288 FHPTNHAYI------QSLLKRYQPHRVPSTCCAPVKTKPLSMLYV-DNGRVLLDHHKDMIVEECG 345

  Fly   945 C 945
            |
Human   346 C 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 37/107 (35%)
NODALNP_060525.3 TGF_beta_NODAL 245..346 CDD:381637 37/109 (34%)

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