DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and myo

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster


Alignment Length:731 Identity:156/731 - (21%)
Similarity:248/731 - (33%) Gaps:254/731 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 INCNGISSSNYYASNLESHKGCTLCHESGKPNIYTDKDNP---------------HTDYNIY--- 343
            :|.|.|.....|..||:|.|     ...|:.||...|...               .|..|.|   
  Fly    39 VNSNEIQFPGSYRFNLDSKK-----INIGRMNILGHKRGNFRVTRYVTVTVLLILSTAVNAYAQP 98

  Fly   344 -NKYHSNNNFNKKTNQPHNNIAPSDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIWETIYRVD 407
             ||..||::         ||.:|.              .:.||::.|.|                
  Fly    99 ENKSFSNSS---------NNDSPE--------------MVMLSNETNNS---------------- 124

  Fly   408 GGRMIPNNAFGSSGKNLDQKTIKLRAFASPGSHLFNGRGGRTDQRSERDPSHHKYRSPFDFTFNI 472
              ..:.:...|||..:.|.|              .|...|....:.:..|.              
  Fly   125 --AKVLSEKNGSSSISADDK--------------INENMGIFQMKVQSKPG-------------- 159

  Fly   473 SKNNVYGKVLRNRSLERIDK----KNSFLNGWTEN---RQLKINSQIAS-----MPIELKSHHNS 525
            .|:....||..:..|.|:..    :|:.:|  .|:   |||:..:::.|     |.|.::.:...
  Fly   160 KKSTPLAKVSEHGDLSRVQSVSLYRNTLIN--IESMLQRQLREKAKVDSIESIKMHILMRLNLKK 222

  Fly   526 SPKELKSGAVRKVNGINGTQMNENALKKSTY-----PIDINHSIDNKTH----------TGKNGE 575
            .|...|..:|.: |.|:....:.||..|:|.     .||.:|...|.|:          ...:.:
  Fly   223 LPNITKPISVPQ-NIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQ 286

  Fly   576 MSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGN 640
            |..:|....|::.:   |.|:....:|.|   |...|.|                  ::|....:
  Fly   287 MQGDDANTVNEFLI---DLNKNQAKKSDI---PINTNDE------------------EYESILSH 327

  Fly   641 TQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRS-------AQIHIRI---DKPHSLWI-- 693
            ...|..|.||        |......||:|...:..|.|       |.:|:.:   |     ||  
  Fly   328 ISSIYIFPEE--------IQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWD-----WISA 379

  Fly   694 ------EKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFRASFQVDP 752
                  |:.|..|.|.::.|        .|..|::   ..:||.|...|..:    ||.|.   |
  Fly   380 HQPGLLEEIKKQPRKDIVVT--------IHRAIRV---ANTTSFNPKVKMFE----FRHSI---P 426

  Fly   753 KNLG-WQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGN---------SSD 807
            ..|| |...||...:                      |....::.|...::|.         ::|
  Fly   427 SGLGQWVAVDLKSLL----------------------GNLGSNMTQEILIKGAETWMKSLVVTTD 469

  Fly   808 YLSTNPNRPFLVLHTE-SSRTRRVRRRAV--DC-GGALNGQCCKESFYVSFKALGWDDWIIAPRG 868
            ..|.||    |.:|.| .|:.:..|:|:|  || ....:.:||:....|:|.:.|| .:::||..
  Fly   470 NTSKNP----LTVHIEIGSQKKHRRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGW-HFVVAPTS 529

  Fly   869 YFANYCRGDCTGSFRTPDTFQTFHAHFIEEY---RKMGLMNGMRPCCAPIKFSSMSLIYYGDD-G 929
            :.|.:|.|||             ...::|:|   ....|.....|||:|.|.||:||:|:.|: .
  Fly   530 FDAYFCSGDC-------------KVGYLEQYPHTHLAALTTSATPCCSPTKMSSLSLLYFDDNHN 581

  Fly   930 IIKRDLPKMVVDECGC 945
            ::...:|.|.|:.|.|
  Fly   582 LVLSVIPNMSVEGCSC 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 31/103 (30%)
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 31/104 (30%)

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