DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and myo

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster


Alignment Length:731 Identity:156/731 - (21%)
Similarity:248/731 - (33%) Gaps:254/731 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 INCNGISSSNYYASNLESHKGCTLCHESGKPNIYTDKDNP---------------HTDYNIY--- 343
            :|.|.|.....|..||:|.|     ...|:.||...|...               .|..|.|   
  Fly    39 VNSNEIQFPGSYRFNLDSKK-----INIGRMNILGHKRGNFRVTRYVTVTVLLILSTAVNAYAQP 98

  Fly   344 -NKYHSNNNFNKKTNQPHNNIAPSDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIWETIYRVD 407
             ||..||::         ||.:|.              .:.||::.|.|                
  Fly    99 ENKSFSNSS---------NNDSPE--------------MVMLSNETNNS---------------- 124

  Fly   408 GGRMIPNNAFGSSGKNLDQKTIKLRAFASPGSHLFNGRGGRTDQRSERDPSHHKYRSPFDFTFNI 472
              ..:.:...|||..:.|.|              .|...|....:.:..|.              
  Fly   125 --AKVLSEKNGSSSISADDK--------------INENMGIFQMKVQSKPG-------------- 159

  Fly   473 SKNNVYGKVLRNRSLERIDK----KNSFLNGWTEN---RQLKINSQIAS-----MPIELKSHHNS 525
            .|:....||..:..|.|:..    :|:.:|  .|:   |||:..:::.|     |.|.::.:...
  Fly   160 KKSTPLAKVSEHGDLSRVQSVSLYRNTLIN--IESMLQRQLREKAKVDSIESIKMHILMRLNLKK 222

  Fly   526 SPKELKSGAVRKVNGINGTQMNENALKKSTY-----PIDINHSIDNKTH----------TGKNGE 575
            .|...|..:|.: |.|:....:.||..|:|.     .||.:|...|.|:          ...:.:
  Fly   223 LPNITKPISVPQ-NIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQ 286

  Fly   576 MSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGN 640
            |..:|....|::.:   |.|:....:|.|   |...|.|                  ::|....:
  Fly   287 MQGDDANTVNEFLI---DLNKNQAKKSDI---PINTNDE------------------EYESILSH 327

  Fly   641 TQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRS-------AQIHIRI---DKPHSLWI-- 693
            ...|..|.||        |......||:|...:..|.|       |.:|:.:   |     ||  
  Fly   328 ISSIYIFPEE--------IQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWD-----WISA 379

  Fly   694 ------EKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFRASFQVDP 752
                  |:.|..|.|.::.|        .|..|::   ..:||.|...|..:    ||.|.   |
  Fly   380 HQPGLLEEIKKQPRKDIVVT--------IHRAIRV---ANTTSFNPKVKMFE----FRHSI---P 426

  Fly   753 KNLG-WQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGN---------SSD 807
            ..|| |...||...:                      |....::.|...::|.         ::|
  Fly   427 SGLGQWVAVDLKSLL----------------------GNLGSNMTQEILIKGAETWMKSLVVTTD 469

  Fly   808 YLSTNPNRPFLVLHTE-SSRTRRVRRRAV--DC-GGALNGQCCKESFYVSFKALGWDDWIIAPRG 868
            ..|.||    |.:|.| .|:.:..|:|:|  || ....:.:||:....|:|.:.|| .:::||..
  Fly   470 NTSKNP----LTVHIEIGSQKKHRRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGW-HFVVAPTS 529

  Fly   869 YFANYCRGDCTGSFRTPDTFQTFHAHFIEEY---RKMGLMNGMRPCCAPIKFSSMSLIYYGDD-G 929
            :.|.:|.|||             ...::|:|   ....|.....|||:|.|.||:||:|:.|: .
  Fly   530 FDAYFCSGDC-------------KVGYLEQYPHTHLAALTTSATPCCSPTKMSSLSLLYFDDNHN 581

  Fly   930 IIKRDLPKMVVDECGC 945
            ::...:|.|.|:.|.|
  Fly   582 LVLSVIPNMSVEGCSC 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078 23/145 (16%)
TGF_beta 843..945 CDD:278448 31/105 (30%)
myoNP_726604.1 TGF_beta 506..597 CDD:278448 31/104 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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