DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and bmp5

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_957345.1 Gene:bmp5 / 394026 ZFINID:ZDB-GENE-040426-1413 Length:446 Species:Danio rerio


Alignment Length:526 Identity:115/526 - (21%)
Similarity:183/526 - (34%) Gaps:153/526 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   472 ISKNNVYG----KVLRNRSLERIDKKNSFLNGWTEN-RQLKINSQIASMPIELKSHHNSSPKELK 531
            :..|:|:.    :.|||.....|.::...:.|.... |......|.:|.|:.:...:|:...|  
Zfish    21 LGDNHVHSSFIYRRLRNHERREIQREILSILGLPHRPRPFSPGKQASSAPLFMLDLYNAMTTE-- 83

  Fly   532 SGAVRKVNGINGTQMNENALKKSTYPIDINHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTHDKNR 596
                           .|||:        :..|:..|......|               ..|..:|
Zfish    84 ---------------EENAI--------LGKSLAGKVRKSAPG---------------APHGYSR 110

  Fly   597 --------YHEGRSSIGYQ-PAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGT 652
                    .|...:.:..| |.:.|       .|..:|.:|.:.:  ..|....:....|:....
Zfish   111 APPRVPQPQHSRAAPLSSQSPPLAN-------AHDTNFLNDADMV--MSFVNLVERDKDFSHHRR 166

  Fly   653 QYRQYRI-LEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKP 716
            .||::|. |....:...|.:.:..|...|.|||.:                              
Zfish   167 HYREFRFDLTQIPEGEAVTAAEFRIYKDQSHIRYE------------------------------ 201

  Fly   717 HHRIKIWVFQLSTSINITE---KGIDKAIIFRASFQVDPKNL-----GWQKFDLTDTIREWYGHT 773
            :..:|:.::|:     |.|   :..|       :|.:|.|.:     ||..||:|.|...|..:.
Zfish   202 NITLKVTIYQV-----IKEYPNRDPD-------TFLLDWKKIRATDGGWLVFDITATSNHWVLNP 254

  Fly   774 SHEK-LRLLIDCT----------GCGGR--------YSLHLFQTSK-----LRGNSSDYLSTNPN 814
            .... |:|.::.|          |..||        :.:..|:.|:     :|...|...|.|.|
Zfish   255 QQNMGLQLCVETTDGRSINMKSAGIIGRNGPQSKQPFLVAFFKASEVLLRSVRATGSKKKSHNRN 319

  Fly   815 RPFLVLHTESSRTRRVRRRAVDCGGALNGQ----CCKESFYVSFKALGWDDWIIAPRGYFANYCR 875
            :         |:|:.....|:..|.....:    |.|...||||:.|||.||||||.||.|.||.
Zfish   320 K---------SKTQVKSTPALKSGDQNTSEQRQACKKHELYVSFRDLGWQDWIIAPEGYAAFYCD 375

  Fly   876 GDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGMRPCCAPIKFSSMSLIYYGD-DGIIKRDLPKMV 939
            |:|:..... ....|.||........|...|..:|||||.|.:::|::|:.| ..:|.:....||
Zfish   376 GECSFPLNA-HMNATNHAIVQTLVHLMFPDNVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMV 439

  Fly   940 VDECGC 945
            |..|||
Zfish   440 VRSCGC 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 41/100 (41%)
bmp5NP_957345.1 TGFb_propeptide 24..295 CDD:459906 61/361 (17%)
TGF_beta_BMP5 334..446 CDD:381665 44/113 (39%)

Return to query results.
Submit another query.