DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and inhbb

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_571143.2 Gene:inhbb / 30275 ZFINID:ZDB-GENE-990415-2 Length:393 Species:Danio rerio


Alignment Length:426 Identity:115/426 - (26%)
Similarity:169/426 - (39%) Gaps:122/426 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   541 INGTQMNENALKKSTYPIDINHSID--NKTHTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSS 603
            :|..||.|.  ...|:||.....:.  .|.|.||..|                       :||  
Zfish    68 LNRLQMRER--PNITHPIPKAAMVTALRKLHAGKVRE-----------------------DGR-- 105

  Fly   604 IGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRR 668
                     :|..|..||..     |..:..|     |.|||:|||..........|.|...|. 
Zfish   106 ---------VEIPNLDGHAA-----HNEVQEE-----TSEIISFAESDDVTPSKSSLYFLISNE- 150

  Fly   669 VPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINI 733
             .:|.|.:..|          :||:                              .|:|..  ..
Zfish   151 -GNQNLYVLQA----------NLWL------------------------------YFKLMP--GT 172

  Fly   734 TEKGIDKAIIFRA-SFQ--------------VDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLID 783
            .|||:.:.:..|. |::              |:.|..||..|.:::.|||........: .|.|.
Zfish   173 LEKGLRRKVTVRVHSYEPGGQNVHWPMMEKRVELKRSGWHTFPVSEAIREMLAKGGRRQ-DLDIH 236

  Fly   784 CTGCGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVLHTESSRTR-RVRRRAVDCGGALNGQCCK 847
            |.||.....|.:....          |...:|||||:..:.:..: |:|:|.::|.|...|.||:
Zfish   237 CEGCEAANVLPILVDP----------SDPSHRPFLVVRAQQADGKHRIRKRGLECDGNNGGLCCR 291

  Fly   848 ESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFR-TPDTFQTFHAHFIEEYRKMGLMNG-MRP 910
            :.||:.|:.:||:||||||.||:.|||.|.|..... .|.:..:||...:.:||..|:..| :..
Zfish   292 QQFYIDFRLIGWNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSVNS 356

  Fly   911 CCAPIKFSSMSLIYYGDD-GIIKRDLPKMVVDECGC 945
            ||.|.|.|:||::|:.|: .|:|||:|.|:|:||||
Zfish   357 CCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGC 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 46/104 (44%)
inhbbNP_571143.2 TGFb_propeptide 54..263 CDD:279078 61/295 (21%)
TGFB 289..392 CDD:214556 45/102 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5640
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 190 1.000 Inparanoid score I3867
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385831at2759
OrthoFinder 1 1.000 - - FOG0000887
OrthoInspector 1 1.000 - - otm24667
orthoMCL 1 0.900 - - OOG6_109477
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4608
SonicParanoid 1 1.000 - - X477
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.900

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