Sequence 1: | NP_651942.2 | Gene: | Actbeta / 43826 | FlyBaseID: | FBgn0024913 | Length: | 946 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571035.1 | Gene: | lft1 / 30145 | ZFINID: | ZDB-GENE-990630-10 | Length: | 358 | Species: | Danio rerio |
Alignment Length: | 386 | Identity: | 87/386 - (22%) |
---|---|---|---|
Similarity: | 144/386 - (37%) | Gaps: | 116/386 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 589 VQTHDKNRY------HEGRSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITF 647
Fly 648 AEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWG 712
Fly 713 ANKPHHRIKI---WVFQLSTSINITEKGIDKAIIFRASFQVDP-KNLGWQKFDLTDTIREWYGHT 773
Fly 774 SHEKLRLLIDCTG-CGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVLHT------------ESS 825
Fly 826 RTRRVRRRAVDCGGALNGQCCKESFYVSFKALGWDD-WIIAPRGYFANYCRGDCTGSFRTPDTFQ 889
Fly 890 TFHAHFIEEYRKMGLMNGMRPCC----APIKFSSMSLIYYGDDGIIK-RDLPKMVVDECGC 945 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Actbeta | NP_651942.2 | TGFb_propeptide | 370..>509 | CDD:279078 | |
TGF_beta | 843..945 | CDD:278448 | 35/107 (33%) | ||
lft1 | NP_571035.1 | TGFb_propeptide | 24..>192 | CDD:366248 | 37/189 (20%) |
TGF_beta_LEFTY1_2 | 265..350 | CDD:381636 | 35/105 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3900 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11848 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |