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Protein Alignment Actbeta and Bmp3

DIOPT Version :9

Sequence 1:	NP_651942.2	Gene:	Actbeta / 43826	FlyBaseID:	FBgn0024913	Length:	946	Species:	Drosophila melanogaster
Sequence 2:	NP_058801.1	Gene:	Bmp3 / 25667	RGDID:	2212	Length:	468	Species:	Rattus norvegicus

Alignment Length:	405	Identity:	89/405 - (21%)
Similarity:	146/405 - (36%)	Gaps:	127/405 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   639 GNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPE-- 701
            |||......|..||..|:    .....|....::..:|.||.::..|.:    .:..:.:.||
  Rat    92 GNTVRSFRAAAAGTLQRK----GLHTFNLTSLTKSENILSATLYFYIGE----LVNTSVNCPESQ 148

  Fly   702 --KHLLNTKRKWGANKPHHRIKI--WVFQLSTSINITEKGIDKAIIFRASFQVDPKNLGWQKFDL 762
              .|        .:.:.|.:|.:  |..|.:.|..:....:|.|..:|.|       :.|...|:
  Rat   149 GCSH--------DSQRQHIQIDLSAWTLQSNQSQLLGHLSVDTAKPYRDS-------MSWLSKDI 198

  Fly   763 TDTIRE---------WYGHTS--HE--KLRLLI----------------------------DCT- 785
            |..:|:         .:..||  ||  |..||.                            |.|
  Rat   199 TQLLRKAKQDEEFLIGFNITSRAHELPKRMLLFPEPYILVYANDAAICEPESVVSSLQRHRDFTA 263

  Fly   786 GCGGRYSLHL-------------------FQTSKLRGNSSDYLST---NPNRPFLVLHT---ESS 825
            |...|...|:                   .|.::|.|....|...   ...:|:..|.|   |.|
  Rat   264 GTVPRLDSHVREALSVERRKKRSTGILLPLQNNELPGAEYQYKEAGVWEERKPYKSLQTQPPEKS 328

  Fly   826 RTRRVRRRAVDCGGALNGQ----------------------CCKESFYVSFKALGWDDWIIAPRG 868
            |:::.:|:    |....||                      |.:....|.|..:||.:|||:|:.
  Rat   329 RSKKKQRK----GPHQKGQTLQFDEQTLKKARRKQWIEPRNCARRYLKVDFADIGWSEWIISPKS 389

  Fly   869 YFANYCRGDCTGSFRTPDTFQ-TFHAHFIEEYRKMGLMNGM-RPCCAPIKFSSMSLIYYGDD-GI 930
            :.|.||.|.|  .|..|.:.: :.||......|.:|:::|: .|||.|.|.||:|::::.:: .:
  Rat   390 FDAYYCSGAC--QFPMPKSLKPSNHATIQSIVRAVGVVSGIPEPCCVPEKMSSLSILFFDENKNV 452

  Fly   931 IKRDLPKMVVDECGC 945
            :.:..|.|.||.|.|
  Rat   453 VLKVYPNMTVDSCAC 467

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.