DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and Bmp4

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:XP_063130065.1 Gene:Bmp4 / 25296 RGDID:2213 Length:455 Species:Rattus norvegicus


Alignment Length:401 Identity:92/401 - (22%)
Similarity:150/401 - (37%) Gaps:111/401 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   582 EYFND-YSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEII 645
            :|..| |.:|:.::....:.:.:        .:||..:..   |.|:...:..||:...|    |
  Rat   128 DYMRDLYRLQSGEEEEEEQSQGT--------GLEYPERPA---SRANTVRSFHHEEHLEN----I 177

  Fly   646 TFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKP---HSLWIEKAKSLPEK----H 703
            ....|.:.:|.:..|....:|..:.|.:|.:...|:....|..   |.:.|.:....|.:    |
  Rat   178 PGTSESSAFRFFFNLSSIPENEVISSAELRLFREQVDQGPDWEQGFHRINIYEVMKPPAEMVPGH 242

  Fly   704 LLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFRASFQVDPKNLGWQKFDLTDTIRE 768
            |:.  |.......||             |:|.                     |:.||::..:..
  Rat   243 LIT--RLLDTRLVHH-------------NVTR---------------------WETFDVSPAVLR 271

  Fly   769 W-------YGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSDYLSTNPN--------RPFL 818
            |       ||        |.|:.|        ||.||...:|.......:.|.        ||.|
  Rat   272 WTREKQPNYG--------LAIEVT--------HLHQTRTHQGQHVRISRSLPQGSGNWAQLRPLL 320

  Fly   819 VLHTESSR----TRRVRRRA----VDCGGALNGQCCKESFYVSFKALGWDDWIIAPRGYFANYCR 875
            |......|    |||..:|:    .......|..|.:.|.||.|..:||:|||:||.||.|.||.
  Rat   321 VTFGHDGRGHTLTRRRAKRSPKHHPQRSRKKNKNCRRHSLYVDFSDVGWNDWIVAPPGYQAFYCH 385

  Fly   876 GDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGM-----RPCCAPIKFSSMSLIYYGD-DGIIKRD 934
            |||  .|...|...:.:...::.     |:|.:     :.||.|.:.|::|::|..: |.::.::
  Rat   386 GDC--PFPLADHLNSTNHAIVQT-----LVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKN 443

  Fly   935 LPKMVVDECGC 945
            ..:|||:.|||
  Rat   444 YQEMVVEGCGC 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 35/105 (33%)
Bmp4XP_063130065.1 None

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