DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and Gdf7

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001299805.1 Gene:Gdf7 / 238057 MGIID:95690 Length:461 Species:Mus musculus


Alignment Length:270 Identity:68/270 - (25%)
Similarity:95/270 - (35%) Gaps:91/270 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   757 WQKFDLTDTI---REW------------------------------------YGHTSHEKLRLLI 782
            |:.||:||.:   |.|                                    .|.|:.|:..||:
Mouse   201 WEAFDVTDAVQSHRRWPRASRKFCLVLRAVTASESSPLALRRLGFGWPGGGDGGGTAAEERALLV 265

  Fly   783 DCTGCGGRYSLH---LFQTSKLRGNSSDYLSTNPNRPFLVLHTESSRTRRV----RRRAVDCGGA 840
            ..:....:.||.   ..|...||..:.......|.......:....|.||.    .|.|...||.
Mouse   266 ISSRTQRKESLFREIRAQARALRAAAEPPPDPGPGAGSRKANLGGRRRRRTALAGTRGAQGSGGG 330

  Fly   841 LNG-------------------------QCCKESFYVSFKALGWDDWIIAPRGYFANYCRGDCTG 880
            ..|                         :|.::|.:|.||.||||||||||..|.|.:|.|.|..
Mouse   331 GGGGGGGGGGGGGGGGGAGRGHGRRGRSRCSRKSLHVDFKELGWDDWIIAPLDYEAYHCEGVCDF 395

  Fly   881 SFRT---PDTFQTFHAHFIEEYRKMGLMNGMRP------CCAPIKFSSMSLIYY-GDDGIIKRDL 935
            ..|:   |    |.|| .|:.     |:|.|.|      ||.|.:.|.:|::|. ..:.::.:..
Mouse   396 PLRSHLEP----TNHA-IIQT-----LLNSMAPDAAPASCCVPARLSPISILYIDAANNVVYKQY 450

  Fly   936 PKMVVDECGC 945
            ..|||:.|||
Mouse   451 EDMVVEACGC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 40/109 (37%)
Gdf7NP_001299805.1 TGFb_propeptide 87..235 CDD:480997 7/33 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..360 11/72 (15%)
TGF_beta_GDF5_6_7 363..461 CDD:381644 41/108 (38%)

Return to query results.
Submit another query.