DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and Tgfb2

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001316036.1 Gene:Tgfb2 / 21808 MGIID:98726 Length:442 Species:Mus musculus


Alignment Length:502 Identity:110/502 - (21%)
Similarity:176/502 - (35%) Gaps:168/502 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 QLKINS------QIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENALKKSTYPIDINHS 563
            :||:.|      :...:|.|:.|.:||:...|:..|.|:.......:.:|....|..|.||:...
Mouse    47 KLKLTSPPEDYPEPDEVPPEVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPSH 111

  Fly   564 IDNKT----HTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSSI--GYQPAIHNIEYENQKGHH 622
            :.::|    .|..:|.:                  ..:...:|.:  ||..||            
Mouse   112 LPSETVCPVVTTPSGSL------------------GSFCSRQSQVLCGYLDAI------------ 146

  Fly   623 ESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQY-RILEFSAQNRRVPSQKLSIRSAQIHI-RI 685
                                       ..|.||.| ||:.|........:..|.  .|:..: |:
Mouse   147 ---------------------------PPTFYRPYFRIVRFDVSTMEKNASNLV--KAEFRVFRL 182

  Fly   686 DKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINI---TEKGID-KAIIFRA 746
            ..|.:...|:                         :|.::|:..|.::   |::.|| |.:..||
Mouse   183 QNPKARVAEQ-------------------------RIELYQILKSKDLTSPTQRYIDSKVVKTRA 222

  Fly   747 SFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLH----LFQTS-------- 799
            ..:       |..||:||.::||.    |.|.|.|      |.:.|||    .|..|        
Mouse   223 EGE-------WLSFDVTDAVQEWL----HHKDRNL------GFKISLHCPCCTFVPSNNYIIPNK 270

  Fly   800 ------KLRG--NSSDYLS------------TNPNRPFLVL------HTESSRTRRVRRRAVD-- 836
                  :..|  .:|.|.|            |:...|.|:|      ..||.::.|.::||:|  
Mouse   271 SEELEARFAGIDGTSTYASGDQKTIKSTRKKTSGKTPHLLLMLLPSYRLESQQSSRRKKRALDAA 335

  Fly   837 -CGGALNGQCCKESFYVSFKA-LGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEY 899
             |...:...||....|:.||. ||| .||..|:||.||:|.|.|...:.:    .|.|...:..|
Mouse   336 YCFRNVQDNCCLRPLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWSS----DTQHTKVLSLY 395

  Fly   900 RKMGLMNGMRPCCAPIKFSSMSLIYY-GDDGIIKRDLPKMVVDECGC 945
            ..:.......|||.......::::|| |:...|:: |..|:|..|.|
Mouse   396 NTINPEASASPCCVSQDLEPLTILYYIGNTPKIEQ-LSNMIVKSCKC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078 2/3 (67%)
TGF_beta 843..945 CDD:278448 32/103 (31%)
Tgfb2NP_001316036.1 TGFb_propeptide 21..256 CDD:279078 60/309 (19%)
TGF_beta 344..441 CDD:278448 32/102 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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