DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and Tgfb1

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_035707.1 Gene:Tgfb1 / 21803 MGIID:98725 Length:390 Species:Mus musculus


Alignment Length:419 Identity:97/419 - (23%)
Similarity:137/419 - (32%) Gaps:150/419 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 NKTHTGKNGEMSHNDYEYFNDY------SVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGHHES 624
            |.|.....||.:..:.|...||      .|...|:|                |..||..|     
Mouse    82 NSTRDRVAGESADPEPEPEADYYAKEVTRVLMVDRN----------------NAIYEKTK----- 125

  Fly   625 FADDHENIDHEDF-FGNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKP 688
                  :|.|..: |.||.:|                     ...||...|..|:          
Mouse   126 ------DISHSIYMFFNTSDI---------------------REAVPEPPLLSRA---------- 153

  Fly   689 HSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVF---QLSTSINITEKGIDKAIIFRASFQV 750
             .|.:::.||..|:| :...:|:..|.       |.:   :|.|..:..|               
Mouse   154 -ELRLQRLKSSVEQH-VELYQKYSNNS-------WRYLGNRLLTPTDTPE--------------- 194

  Fly   751 DPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTS--------------KL 801
                  |..||:|..:|:|.......:          |.|:|.|....|              |.
Mouse   195 ------WLSFDVTGVVRQWLNQGDGIQ----------GFRFSAHCSCDSKDNKLHVEINGISPKR 243

  Fly   802 RGNSSDYLST--NPNRPFLVL---------HTESSRTRRVRRRAVD---CGGALNGQCCKESFYV 852
            ||:    |.|  :.|||||:|         |..|||    .|||:|   |..:....||....|:
Mouse   244 RGD----LGTIHDMNRPFLLLMATPLERAQHLHSSR----HRRALDTNYCFSSTEKNCCVRQLYI 300

  Fly   853 SF-KALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGMRPCCAPIK 916
            .| |.||| .||..|:||.||:|.|.|...:    :..|.::..:..|.:........|||.|..
Mouse   301 DFRKDLGW-KWIHEPKGYHANFCLGPCPYIW----SLDTQYSKVLALYNQHNPGASASPCCVPQA 360

  Fly   917 FSSMSLIYYGDDGIIKRDLPKMVVDECGC 945
            ...:.::||.........|..|:|..|.|
Mouse   361 LEPLPIVYYVGRKPKVEQLSNMIVRSCKC 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 30/100 (30%)
Tgfb1NP_035707.1 TGFb_propeptide 30..261 CDD:459906 56/280 (20%)
Straightjacket domain. /evidence=ECO:0000250|UniProtKB:P07200 30..74
Arm domain. /evidence=ECO:0000250|UniProtKB:P07200 75..271 57/290 (20%)
Bowtie tail. /evidence=ECO:0000250|UniProtKB:P01137 226..252 6/29 (21%)
Cell attachment site. /evidence=ECO:0000255 244..246 1/1 (100%)
TGF_beta_TGFB1 292..390 CDD:381654 31/103 (30%)
Blue background indicates that the domain is not in the aligned region.

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