DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and tig-2

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_504271.1 Gene:tig-2 / 178864 WormBaseID:WBGene00006570 Length:366 Species:Caenorhabditis elegans


Alignment Length:440 Identity:101/440 - (22%)
Similarity:157/440 - (35%) Gaps:156/440 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   543 GTQMNENALKKSTYPIDINHSIDNKTHTGKNG-EMSHNDYEYFNDYSVQTHDKNRYHEGRSSIGY 606
            |.|:.|      .:.||||          .|| .:..|:|       |.|:.|..|.:       
 Worm    45 GEQIRE------LFNIDIN----------PNGPAVKANNY-------VSTYMKRLYKQ------- 79

  Fly   607 QPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQ--NRRV 669
               :.|  ||:.:.|:|...:...:.|                        ||:...||  :.|:
 Worm    80 ---LEN--YEHGENHNEEEVNAWLSAD------------------------RIVSHMAQEVSHRL 115

  Fly   670 PSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINIT 734
            .....|||.|:.|:                |.|.        |.:....:::|.:          
 Worm   116 DDGSYSIRFAKEHV----------------PAKE--------GQSIVRAQLRIHI---------- 146

  Fly   735 EKGIDKAIIFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTS 799
                 :.|:....|.::..||.      .||:.     .|.:...::.|.|....|:| || |.|
 Worm   147 -----QGIVSPVFFYIEDTNLP------GDTVL-----VSSDDPTVVTDVTTMVDRWS-HL-QLS 193

  Fly   800 KL-----RGNSSDYLSTNPNRPFLVLHTE-------SSRTRR-----------VRRRAVDCGGAL 841
            .|     |.:::|.|..   ..|||:..:       ..|:||           :|::......|.
 Worm   194 TLPIVTARASTNDELKI---EAFLVIALKDEDAGPPKKRSRRSASTTPISAPPMRQKVKRSESAY 255

  Fly   842 ------NGQCCKESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYR 900
                  |.:|.::..||.|..|||..|:|||.|:.|.||.|||:..| :.:...|.|| .::...
 Worm   256 FEKPNENERCQRKGLYVDFDILGWKQWVIAPEGFSAFYCSGDCSAPF-SKEMNATSHA-IVQSTL 318

  Fly   901 KMGLMNGMRPC-CAPIKFSSMSLIYYGDDGIIK----RDLPKMVVDECGC 945
            .....|...|. |||....|..:::...:..::    ||   ||||||||
 Worm   319 HRVRPNSTTPAKCAPSSLGSYKILFVDQNKQVQIKRYRD---MVVDECGC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 36/106 (34%)
tig-2NP_504271.1 TGF_beta_BMP5_like 264..366 CDD:381639 38/107 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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