DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and unc-129

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_501566.1 Gene:unc-129 / 177719 WormBaseID:WBGene00006852 Length:407 Species:Caenorhabditis elegans


Alignment Length:393 Identity:84/393 - (21%)
Similarity:145/393 - (36%) Gaps:104/393 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   616 ENQKGHHESFADDHENIDHEDFFGNT-------------QEIITFAEEGTQYRQYRI---LEFSA 664
            |:.|..:|:|.|:..|.|     ||.             ||::.|..||....:..:   |.|..
 Worm    55 EHMKNLYENFIDEDSNED-----GNLVRAIEPAVGKFEGQEVLVFDVEGFDSHESIMRAELHFYL 114

  Fly   665 QNR----RVPSQKLSIRSAQIH----------IRIDKPHSL------WIEKAKSLPEKHLLNTKR 709
            :.|    |..|:::..:|..::          ||:....:|      | :..||:.:.:.|:.|:
 Worm   115 RRRDSFARRRSRQIRAKSVCVNEYCRQQTLKKIRVGGDENLEEYKVIW-DATKSVFDSYHLDAKQ 178

  Fly   710 K-WGANKPHHRIKIWVFQLSTS---------INITEKGIDKAIIFRASFQVDPK--NLGWQKFDL 762
            . :...:.|.:::.:...:..|         :|.|   :|...:.:.:.|...|  :||      
 Worm   179 AVFRITREHSKMRPYAEMIRKSTPFLVIYSKVNHT---LDTVSVMKQTEQTKRKRRDLG------ 234

  Fly   763 TDTIREWYGHTS-------HEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVL 820
            .:.:||:|.:.|       .|.::.                :..|....|.:..|.:..:.|   
 Worm   235 NEELREYYNYNSIPLDNDDREPIKR----------------KNGKKNSLSEEISSEDVWQGF--- 280

  Fly   821 HTESSRTRRVR----RRAVDCGGAL---NGQCCKESFYVSFKALGWDDWIIAPRGYFANYCRGDC 878
            ..|:||..|.|    ..|.|....|   ..:|.||...||.|..|||.::|.|:....::|:|.|
 Worm   281 GEETSREERERIANEELANDVRVVLLQNKNRCHKEGVLVSLKHFGWDRYVIEPKTIETSFCKGKC 345

  Fly   879 TGSFRTPDTFQTFHAHFIEEYRKMGLMNGMRPCCAPIKFSSMSLIYYGDDG-IIKRDLPKMVVDE 942
            .....|...... ||..      ..|......||||....|::..|..:.| .:.|:..||::..
 Worm   346 AKPMLTSGKASN-HAML------QSLFAAEPVCCAPTNLKSLNFWYRDEKGRTVIRNYSKMLIGS 403

  Fly   943 CGC 945
            |.|
 Worm   404 CSC 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 29/102 (28%)
unc-129NP_501566.1 TGFB 312..406 CDD:214556 29/100 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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