DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and Mstn

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_034964.1 Gene:Mstn / 17700 MGIID:95691 Length:376 Species:Mus musculus


Alignment Length:426 Identity:96/426 - (22%)
Similarity:159/426 - (37%) Gaps:108/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   557 PIDINHSIDNKTHTGKNGEMS------HNDYEYFNDYSVQTHDKNRYHEG--------RSSIGYQ 607
            |:|:|...:.:.:..|.|..:      :..|.......:|...|.|....        |..:...
Mouse    21 PVDLNEGSEREENVEKEGLCNACAWRQNTRYSRIEAIKIQILSKLRLETAPNISKDAIRQLLPRA 85

  Fly   608 PAIHNI--EYENQKGHHESFADDHE--NIDHEDFFGNTQEIITFAEEGTQYRQYR------ILEF 662
            |.:..:  :|:.|:       ||..  :::.:|:...|:.|||...|.....|..      ..:|
Mouse    86 PPLRELIDQYDVQR-------DDSSDGSLEDDDYHATTETIITMPTESDFLMQADGKPKCCFFKF 143

  Fly   663 SAQ---NRRVPSQKLSIRSAQIHIR-IDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIW 723
            |::   |:.|.:|      ..|::| :..|.:::::..:.:  |.:.:..|..|       |:..
Mouse   144 SSKIQYNKVVKAQ------LWIYLRPVKTPTTVFVQILRLI--KPMKDGTRYTG-------IRSL 193

  Fly   724 VFQLSTSINITEKGIDKAIIFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCG 788
            ...:|....|                       ||..|:...::.|.....          :..|
Mouse   194 KLDMSPGTGI-----------------------WQSIDVKTVLQNWLKQPE----------SNLG 225

  Fly   789 GRYSLHLFQTSKLRGNSSDYLSTNPN------RPFLVLHTESSRTRRVRRRAVDCG-GALNGQCC 846
                   .:...|..|..|...|.|.      .|||.:....:..|..|...:||. .:...:||
Mouse   226 -------IEIKALDENGHDLAVTFPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESRCC 283

  Fly   847 KESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTF-HAHFIEEYRKMGLMNGMRP 910
            :....|.|:|.|| ||||||:.|.||||.|:|...|     .|.: |.|.:.:....|   ...|
Mouse   284 RYPLTVDFEAFGW-DWIIAPKRYKANYCSGECEFVF-----LQKYPHTHLVHQANPRG---SAGP 339

  Fly   911 CCAPIKFSSMSLIYY-GDDGIIKRDLPKMVVDECGC 945
            ||.|.|.|.::::|: |.:.||...:|.||||.|||
Mouse   340 CCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 41/103 (40%)
MstnNP_034964.1 TGFb_propeptide 37..250 CDD:366248 42/274 (15%)
TGF_beta_GDF8 269..376 CDD:381658 45/116 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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