DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and Inha

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_034694.3 Gene:Inha / 16322 MGIID:96569 Length:366 Species:Mus musculus


Alignment Length:402 Identity:82/402 - (20%)
Similarity:124/402 - (30%) Gaps:149/402 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 GYQPAIHNIEYENQKG--HHESFADDHENIDHEDFF--------------GNTQEIITFAEEGTQ 653
            |..|.|..:...:..|  .|.:...:.|::.....|              |..||    ||||..
Mouse    52 GGDPGIRRLPRRHAVGGFMHRTSEPEEEDVSQAILFPATGATCEDQPAARGLAQE----AEEGLF 112

  Fly   654 YRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKW---GANK 715
            ...:|           |||         |||                 .|.:.:.:.|   |..:
Mouse   113 TYVFR-----------PSQ---------HIR-----------------SHQVTSAQLWFHTGLGR 140

  Fly   716 PHHRIKIWVFQLSTSINITEKGIDKAIIFRASFQVDPKNLG-----WQKFDLTDTIREWYGHTSH 775
                      :.:.:.|.:...:|..::........|.:||     |....|..:.   :...:|
Mouse   141 ----------KSTAAANSSAPLLDLLVLSSGGPMAVPVSLGQGPPRWAVLHLAASA---FPLLTH 192

  Fly   776 EKLRLLIDC--TGCGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVLHTES---SRTRRVRRRAV 835
            ..|.||:.|  ..|.||                     ....||||.||.:   |...|.||...
Mouse   193 PILVLLLRCPLCSCSGR---------------------PETTPFLVAHTRARAPSAGERARRSTP 236

  Fly   836 DC-----------------GGALNGQCCKESFYVSFKALGWDDWIIAPRGYFANYCRGDC----- 878
            ..                 ..|.:..|.:.:..:||:.||||.||:.|..:..:||.|.|     
Mouse   237 SVPWPWSPAALRLLQRPPEEPAAHAFCHRAALNISFQELGWDRWIVHPPSFIFHYCHGSCGMPTS 301

  Fly   879 ------TGSFRTPDTFQTFHAHFIEEYRKMGLMNGMRPCCAPIKFSSMSL-IYYGDDG--IIKRD 934
                  .|...||             .:.:.|:.|.:||||.:..|..|| :....||  ..|.:
Mouse   302 DLPLPVPGVPPTP-------------VQPLFLVPGAKPCCAALPGSMRSLRVRTTSDGGYSFKYE 353

  Fly   935 L-PKMVVDECGC 945
            : |.::...|.|
Mouse   354 MVPNLITQHCAC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 31/116 (27%)
InhaNP_034694.3 TGF_beta 263..366 CDD:295336 32/116 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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