DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and Lefty1

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_034224.1 Gene:Lefty1 / 13590 MGIID:107405 Length:368 Species:Mus musculus


Alignment Length:337 Identity:73/337 - (21%)
Similarity:121/337 - (35%) Gaps:87/337 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   637 FFGNTQEI---ITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKS 698
            |..|.:|:   ...:|..|     .:|.|..:.|..|:.:|    .|..:|:.:         :.
Mouse    78 FSQNLREVAGRFLVSETST-----HLLVFGMEQRLPPNSEL----VQAVLRLFQ---------EP 124

  Fly   699 LPEKHLLNTKRKWGANKPHH---RIKI-WVFQLSTSINITEKGIDKAIIFRASFQVDPKNLGWQK 759
            :|...|...||.    .||.   |:.| |       :...:.|.::..:..:.. |.....||:.
Mouse   125 VPRTALRRQKRL----SPHSARARVTIEW-------LRFRDDGSNRTALIDSRL-VSIHESGWKA 177

  Fly   760 FDLTDTIREWYGHTSHEKLRLLIDCT------GCGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFL 818
            ||:|:.:..|. ..|..:..||:..:      | .|.:|.|.......:|...   ......|.|
Mouse   178 FDVTEAVNFWQ-QLSRPRQPLLLQVSVQREHLG-PGTWSSHKLVRFAAQGTPD---GKGQGEPQL 237

  Fly   819 VLHTESSRTRRVRRRAVDCGGALN----------GQCCKESFYVSFKALGW-DDWIIAPRGYFAN 872
            .|||...:         |.|...|          .:||::..|:..:.:.| ::||:.|.|:...
Mouse   238 ELHTLDLK---------DYGAQGNCDPEAPVTEGTRCCRQEMYLDLQGMKWAENWILEPPGFLTY 293

  Fly   873 YCRGDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGMRPCCAPIKFSSMSLIYYGDDGIIKR---- 933
            .|.|.|   .:.|::. |....|:          |.|.|.|. :.:|:.:|....:|...|    
Mouse   294 ECVGSC---LQLPESL-TSRWPFL----------GPRQCVAS-EMTSLPMIVSVKEGGRTRPQVV 343

  Fly   934 DLPKMVVDECGC 945
            .||.|.|..|.|
Mouse   344 SLPNMRVQTCSC 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 27/104 (26%)
Lefty1NP_034224.1 TGFb_propeptide <43..203 CDD:480997 32/155 (21%)
TGF_beta_LEFTY1_2 264..355 CDD:381636 27/105 (26%)

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