DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and Gdf2

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_062379.3 Gene:Gdf2 / 12165 MGIID:1321394 Length:428 Species:Mus musculus


Alignment Length:252 Identity:61/252 - (24%)
Similarity:93/252 - (36%) Gaps:76/252 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   751 DPKNLGWQKFDLTDTIREWY---GHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSDYLSTN 812
            |.::.||:..:::..::.|.   ..|:..||.:.:.    ..|.|......|...|:.       
Mouse   195 DIRDEGWETLEVSSAVKRWVRADSTTNKNKLEVTVQ----SHRESCDTLDISVPPGSK------- 248

  Fly   813 PNRPFLVL---------------------HTESSRTRRVRRRAVDCGG------ALNG------- 843
             |.||.|:                     |.:.:...:..:.|....|      .|:|       
Mouse   249 -NLPFFVVFSNDRSNGTKETRLELKEMIGHEQETMLVKTAKNAYQVAGESQEEEGLDGYTAVGPL 312

  Fly   844 ------------QCCKESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHA--- 893
                        .|.|.|..|:|:.:|||.|||||:.|.|..|:|.|.... ..|...|.||   
Mouse   313 LARRKRSTGASSHCQKTSLRVNFEDIGWDSWIIAPKEYDAYECKGGCFFPL-ADDVTPTKHAIVQ 376

  Fly   894 ---HFIEEYRKMGLMNGMRPCCAPIKFSSMSLIYYGDDGI--IKRDLPKMVVDECGC 945
               | ::...|:|     :.||.|.|.|.:|::|..|.|:  :|.....|.|.||||
Mouse   377 TLVH-LKFPTKVG-----KACCVPTKLSPISILYKDDMGVPTLKYHYEGMSVAECGC 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 39/107 (36%)
Gdf2NP_062379.3 TGFb_propeptide 69..215 CDD:480997 4/19 (21%)
TGF_beta_BMP9 324..428 CDD:381670 41/111 (37%)
Interaction with ENG. /evidence=ECO:0000250|UniProtKB:Q9UK05 401..415 4/13 (31%)

Return to query results.
Submit another query.