DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and Bmp8b

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_031585.2 Gene:Bmp8b / 12164 MGIID:107335 Length:399 Species:Mus musculus


Alignment Length:368 Identity:86/368 - (23%)
Similarity:141/368 - (38%) Gaps:93/368 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 HESFADD------HENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQ 680
            :.:..||      ..::|..|...:...|:. .:....|::....||.....::|:.: ::.:|:
Mouse    80 YRAMTDDSGGGTPQPHLDRADLIMSFVNIVE-RDRTLGYQEPHWKEFHFDLTQIPAGE-AVTAAE 142

  Fly   681 IHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFR 745
            ..|..:             |..|.|||           .:.|.:|::....:..|..:       
Mouse   143 FRIYKE-------------PSTHPLNT-----------TLHISMFEVVQEHSNRESDL------- 176

  Fly   746 ASFQVDPKNL-----GWQKFDLTDTIREWYGHTSHEK---LRLLID----------CTGCGGRY- 791
              |.:|.:.|     ||...|:|.....|.  .:|.|   |||.::          ..|..||. 
Mouse   177 --FFLDLQTLRSGDEGWLVLDITAASDRWL--LNHHKDLGLRLYVETEDGHSIDPGLAGLLGRQA 237

  Fly   792 --SLHLFQTSKLRGNSSDYLSTNPNRPFLVLHTESSRTRRVRR--------RAVDCGGALNGQ-- 844
              |...|.....|.|.|...:....||.     :..:..::.:        ..:|.|...:|:  
Mouse   238 PRSRQPFMVGFFRANQSPVRAPRTARPL-----KKKQLNQINQLPHSNKHLGILDDGHGSHGREV 297

  Fly   845 CCKESFYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGMR 909
            |.:...||||:.|||.|.:|||:||.|.||.|:|.....:... .|.||      ....|::.|:
Mouse   298 CRRHELYVSFRDLGWLDSVIAPQGYSAYYCAGECIYPLNSCMN-STNHA------TMQALVHLMK 355

  Fly   910 P------CCAPIKFSSMSLIYYG-DDGIIKRDLPKMVVDECGC 945
            |      ||.|.:.|::||:||. ::.:|.|....|||..|||
Mouse   356 PDIIPKVCCVPTELSAISLLYYDRNNNVILRRERNMVVQACGC 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 40/110 (36%)
Bmp8bNP_031585.2 TGFb_propeptide 32..248 CDD:279078 37/204 (18%)
TGF_beta 298..398 CDD:278448 39/106 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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