DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and Bmp15

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_033887.1 Gene:Bmp15 / 12155 MGIID:1316745 Length:392 Species:Mus musculus


Alignment Length:379 Identity:99/379 - (26%)
Similarity:145/379 - (38%) Gaps:109/379 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   619 KGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRRVP------------- 670
            |.:|.| ||.|         |:.:|..|...     :..|:::.||...|.|             
Mouse    70 KLYHRS-ADPH---------GHPRENRTIGA-----KMVRLVKPSANTVRPPRGSWHVQTLDFPL 119

  Fly   671 -SQKLS---IRSA-----QIHI---RIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIW 723
             |.:::   ||:.     |:|:   .:......|:.|.::   |||.::|.  |::||....|.|
Mouse   120 ASNQVAYELIRATVVYRHQLHLVNYHLSCHVETWVPKCRT---KHLPSSKS--GSSKPSPMSKAW 179

  Fly   724 VFQLSTSINIT---------EKGIDKAIIFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLR 779
                 |.|:||         .||   ..:.|..|....     ||.:.|...| |:|.||.:...
Mouse   180 -----TEIDITHCIQQKLWNRKG---RSVLRLRFMCQQ-----QKGNETREFR-WHGMTSLDVAF 230

  Fly   780 LLIDCTGCGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVLHTESSRTRRVRRRA------VDC- 837
            ||:.......|..      .||.....:.|:..          |||...|..|:|      ..| 
Mouse   231 LLLYFNDTDDRVQ------GKLLARGQEELTDR----------ESSFLMRSVRQACSIESDASCP 279

  Fly   838 ----GGALNGQCCKESFYVSFKALGWDDWIIAPRGYFANYCRGDCTG----SFRTPDTFQTFHAH 894
                .|::|.||....:.|||..||||.||||||.|..|||:|.||.    ...:|:       |
Mouse   280 SQEHDGSVNNQCSLHPYKVSFHQLGWDHWIIAPRLYTPNYCKGICTRVLPYGLNSPN-------H 337

  Fly   895 FIEEYRKMGLMNGM--RPCCAPIKFSSMSLIYYGDDG-IIKRDLPKMVVDECGC 945
            .|.:.....|:|..  :|.|.|..|..||::....:| |:.::...|:...|.|
Mouse   338 AIIQSLVNELVNHSVPQPSCVPYNFLPMSILLIETNGSILYKEYEGMIAQSCTC 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 37/108 (34%)
Bmp15NP_033887.1 TGF_beta 289..391 CDD:278448 37/108 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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