DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and Bmp3

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001297606.1 Gene:Bmp3 / 110075 MGIID:88179 Length:470 Species:Mus musculus


Alignment Length:368 Identity:73/368 - (19%)
Similarity:121/368 - (32%) Gaps:135/368 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   639 GNTQEIITFAEEGT-QYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPE- 701
            |||......|..|| |.:.......::.     ::..:|.||.::..:.:    .:..:.|.|| 
Mouse    92 GNTVRSFRAAAAGTPQTKGLHTFNLTSL-----TKSENILSATLYFYVGE----LVNISLSCPEP 147

  Fly   702 ---KHLLNTKRKWGANKPHHRIKI--WVFQLSTSINITEKGIDKAIIFRASFQVDPKNLGWQKFD 761
               .|  :|:|:      |.:|.:  |:.:.:.|..:....:|....:|.|       :.|...|
Mouse   148 QGCSH--HTQRQ------HIQIDLSAWILKSNQSQLLGHLSVDVVRPYRDS-------VSWLSKD 197

  Fly   762 LTDTIRE---------WYGHTS--HEKLRLLI------------------------------DCT 785
            :|..:|:         .:..||  ||..:.::                              |.|
Mouse   198 ITQLLRKAKQNEEFLIGFNITSRAHELPKRMLFFPEPYILVYANDAAISEPESVVSSLQRHRDFT 262

  Fly   786 -GCGGRYSLHL-------------------FQTSKLRGNSSDYL---STNPNRPFLVLHT---ES 824
             |.|.|...|:                   .|.::|.|....|.   :....:|:..|.|   |.
Mouse   263 AGTGPRLDSHVREALSVERRKKRSTGILLPLQNNELPGAEYQYKEEGAWEERKPYKSLQTQPPEK 327

  Fly   825 SRTRRVRRRAVDCGGALNGQ----------------------CCKESFYVSFKALGWDDWIIAPR 867
            ||.::.:|:    |....||                      |.:....|.|..:||.:|||:|:
Mouse   328 SRNKKKQRK----GSHQKGQTLQFDEQTLKKARRKQWVEPRNCARRYLKVDFADIGWSEWIISPK 388

  Fly   868 GYFANYCRGDCTGSFRTPDTFQTFHA---------HFIEEYRK 901
            .:.|.||.|.|  .|..|.......|         |.:|||.|
Mouse   389 SFDAFYCSGAC--QFPMPKVAAAAAALHLVLISFLHGVEEYAK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078
TGF_beta 843..945 CDD:278448 24/90 (27%)
Bmp3NP_001297606.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..349 10/38 (26%)
TGF_beta 364..>424 CDD:278448 18/61 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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