DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and LOC101887111

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:XP_005172991.3 Gene:LOC101887111 / 101887111 -ID:- Length:384 Species:Danio rerio


Alignment Length:662 Identity:147/662 - (22%)
Similarity:217/662 - (32%) Gaps:292/662 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 FEVKLINCNGISSSNYYASNLESHKGCTLCHESGKPNIYTDKDNPHTDYNIYNKYHSNNNFNKKT 356
            |||..:.|...|.....|.:.|:....|.|...|.|                           ||
Zfish     6 FEVLCLVCVLSSIRGTPAPDTETPSTSTSCASCGLP---------------------------KT 43

  Fly   357 NQPHNNIAPSDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIWETIYRVDGGRMIPNNAFGSSG 421
            :      .|:|...||::||.||::|.:..:||::||:||                         
Zfish    44 D------GPADGDFLEAVKRHILSRLQMRDRPNITHPIPK------------------------- 77

  Fly   422 KNLDQKTIKLRAFASPGSHLFNGRGGRTDQRSERDPSHHKYRSPFDFTFNISKNNVYGKVLRNRS 486
                                                                             
Zfish    78 ----------------------------------------------------------------- 77

  Fly   487 LERIDKKNSFLNGWTENRQLKINSQIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENAL 551
                                      |:|...||                               
Zfish    78 --------------------------AAMVTALK------------------------------- 85

  Fly   552 KKSTYPIDINHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYE 616
                           |.|.||..|                       :||           :|..
Zfish    86 ---------------KLHAGKLRE-----------------------DGR-----------VEIP 101

  Fly   617 NQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQI 681
            |..||   .|..|| ::.|     |.|||:|||..........|.|...|.  .:|.|.:..|  
Zfish   102 NLDGH---AAYMHE-LEEE-----TSEIISFAETDDSLTSKTSLFFIISNE--GNQNLHVSQA-- 153

  Fly   682 HIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSI----NITEKGIDKAI 742
                    :||: ..|.||......::||         :.:.|:.....:    |:.||      
Zfish   154 --------NLWL-YFKLLPSALEKGSRRK---------VTVKVYSQEPGVGSKWNLVEK------ 194

  Fly   743 IFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSD 807
                  :||.|..||..|.|||.::..:. ....:..|.:.|.||      .......:..||:|
Zfish   195 ------RVDLKRSGWHTFPLTDAVQMVFS-KGDRRQNLDVRCEGC------EKMGVVPILVNSAD 246

  Fly   808 YLSTNPNRPFLVLHTESSRTR-RVRRRAVDCGGALNGQCCKESFYVSFKALGWDDWIIAPRGYFA 871
                ..:|||||:...::..: |:|:|.::|.|: |..||::.||:.|:.:||:||||||.|||.
Zfish   247 ----ESHRPFLVVQARAADNKHRIRKRGLECDGS-NSLCCRQQFYIDFRLIGWNDWIIAPSGYFG 306

  Fly   872 NYCRGDCTGSFR-TPDTFQTFHAHFIEEYRKMGLMNG-MRPCCAPIKFSSMSLIYYGDD-GIIKR 933
            |||.|:|..... .|.:..:||...:.:||..|:..| |..||.|.|.|:||::|:.|: .|:||
Zfish   307 NYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTKLSTMSMLYFDDEYNIVKR 371

  Fly   934 DLPKMVVDECGC 945
            |:|.|:|:||||
Zfish   372 DVPNMIVEECGC 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078 13/138 (9%)
TGF_beta 843..945 CDD:278448 47/104 (45%)
LOC101887111XP_005172991.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385831at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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