DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and LOC101887111

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:XP_073773239.1 Gene:LOC101887111 / 101887111 -ID:- Length:384 Species:Danio rerio


Alignment Length:662 Identity:147/662 - (22%)
Similarity:215/662 - (32%) Gaps:292/662 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 FEVKLINCNGISSSNYYASNLESHKGCTLCHESGKPNIYTDKDNPHTDYNIYNKYHSNNNFNKKT 356
            |||..:.|...|.....|.:.|:....|.|...|.|                           ||
Zfish     6 FEVLCLVCVLSSIRGTPAPDTETPSTSTSCASCGLP---------------------------KT 43

  Fly   357 NQPHNNIAPSDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIWETIYRVDGGRMIPNNAFGSSG 421
            :      .|:|...||::||.||::|.:..:||::||:||                         
Zfish    44 D------GPADGDFLEAVKRHILSRLQMRDRPNITHPIPK------------------------- 77

  Fly   422 KNLDQKTIKLRAFASPGSHLFNGRGGRTDQRSERDPSHHKYRSPFDFTFNISKNNVYGKVLRNRS 486
                                                                             
Zfish    78 ----------------------------------------------------------------- 77

  Fly   487 LERIDKKNSFLNGWTENRQLKINSQIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENAL 551
                                      |:|...||                               
Zfish    78 --------------------------AAMVTALK------------------------------- 85

  Fly   552 KKSTYPIDINHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYE 616
                           |.|.||..|                       :||           :|..
Zfish    86 ---------------KLHAGKLRE-----------------------DGR-----------VEIP 101

  Fly   617 NQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQI 681
            |..||   .|..|| ::.|     |.|||:|||..........|.|...|.  .:|.|.:..|  
Zfish   102 NLDGH---AAYMHE-LEEE-----TSEIISFAETDDSLTSKTSLFFIISNE--GNQNLHVSQA-- 153

  Fly   682 HIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSI----NITEKGIDKAI 742
                    :||: ..|.||......::||         :.:.|:.....:    |:.||      
Zfish   154 --------NLWL-YFKLLPSALEKGSRRK---------VTVKVYSQEPGVGSKWNLVEK------ 194

  Fly   743 IFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSD 807
                  :||.|..||..|.|||.::..:.. ...:..|.:.|.||      .......:..||:|
Zfish   195 ------RVDLKRSGWHTFPLTDAVQMVFSQ-GDRRQNLDVRCEGC------EKMGVVPILVNSAD 246

  Fly   808 YLSTNPNRPFLVLHTE-SSRTRRVRRRAVDCGGALNGQCCKESFYVSFKALGWDDWIIAPRGYFA 871
                ..:|||||:... :....|:|:|.::|.|: |..||::.||:.|:.:||:||||||.|||.
Zfish   247 ----ESHRPFLVVQARVADNKHRIRKRGLECDGS-NSLCCRQQFYIDFRLIGWNDWIIAPSGYFG 306

  Fly   872 NYCRGDCTGSFR-TPDTFQTFHAHFIEEYRKMGLMNG-MRPCCAPIKFSSMSLIYYGDD-GIIKR 933
            |||.|:|..... .|.:..:||...:.:||..|:..| |..||.|.|.|:||::|:.|: .|:||
Zfish   307 NYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTKLSTMSMLYFDDEYNIVKR 371

  Fly   934 DLPKMVVDECGC 945
            |:|.|:|:||||
Zfish   372 DVPNMIVEECGC 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 47/102 (46%)
LOC101887111XP_073773239.1 None

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