DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and LOC101734231

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:XP_004912576.1 Gene:LOC101734231 / 101734231 XenbaseID:XB-GENE-29087623 Length:386 Species:Xenopus tropicalis


Alignment Length:368 Identity:86/368 - (23%)
Similarity:139/368 - (37%) Gaps:111/368 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   631 NIDHEDFFGNTQEIITFAEEG-TQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIE 694
            :|..|.....:..::....:| ||.....||.|...:..:.|:   :|.|::.|           
 Frog    76 SIREEPVLQESDTVLNLIAKGCTQVDSRWILSFDMSSVSISSE---LRLAELRI----------- 126

  Fly   695 KAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQ-LSTSINITEKGIDKAIIFRASFQVD-PKNLG- 756
                    ||.:.:|               || ::..|..|:..::|  .|..|..:| |...| 
 Frog   127 --------HLPSLER---------------FQNVTLDIYHTKGNLEK--FFLGSLTIDFPGTSGS 166

  Fly   757 -WQKFDLTDTIREWYGH--------------TSHEKLRLLIDCTG-CGGRYSLHLFQT----SKL 801
             |:.|::|..::.:...              ||..:.:  |||.| ...|..|.:|.|    |||
 Frog   167 SWKVFNVTQMLQRYLYQKESFSSDKYTQPKATSQAEQK--IDCNGLLSERIMLMVFSTDKPSSKL 229

  Fly   802 RGNSSDYLSTNPNRPFLVLHTESSRT--RRVRRRAVDCGGALNG----------------QCCKE 848
            .|::| .:.|..:..:::...::..|  ||.||...    |||.                .|.:.
 Frog   230 TGSTS-LIETAESSKYVITEADTRETGKRRHRRNRY----ALNSIIRSSFHSQPVGDGKTLCRRV 289

  Fly   849 SFYVSFKALGWDDWIIAPRGYFANYCRGDC----TGSFRTPDTFQTFHA-------HFIEEYRKM 902
            ...|.|:.:||.|.||.|:.:.|..|.|.|    ..:|:     .|.||       ||..|..:.
 Frog   290 DMIVDFEKIGWSDRIIYPKRFNAYRCEGSCPIPLNENFK-----PTNHAYITSLVNHFSPERVEC 349

  Fly   903 GLMNGMRPCCAPIKFSSMSLIYYGDDGIIKRDLPKMVVDECGC 945
                   |.|.|:|...:|::.|..|.|:.:....|:|:||||
 Frog   350 -------PSCVPVKMRPLSMLMYEGDEIVLKHHEDMIVEECGC 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 32/110 (29%)
LOC101734231XP_004912576.1 TGFb_propeptide 50..186 CDD:480997 28/148 (19%)
TGF_beta_NODAL 284..385 CDD:381637 32/112 (29%)

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