DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and bmp5

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:XP_004914553.1 Gene:bmp5 / 100494976 XenbaseID:XB-GENE-479371 Length:449 Species:Xenopus tropicalis


Alignment Length:543 Identity:116/543 - (21%)
Similarity:190/543 - (34%) Gaps:173/543 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 PSHHKYRSPFDFTFNISKNNVYGKVLRNRSLERIDKKNSFLNGWTEN-RQLKINSQIASMPIELK 520
            |.:|.:.|   |.:         :.|||...:.|.::...:.|.... |......|.:|.|:.:.
 Frog    25 PGNHVHSS---FIY---------RRLRNHERKEIQREILSILGLPHRPRPFSPGKQASSAPLFML 77

  Fly   521 SHHNSSPKELKSGAVRKVNGINGTQMNENALKKSTYPIDINHSIDNKTHTGKNGEM--------S 577
            ..:|:..||.....:...  ::|..:....|:|. ||: :.:....|....:|..:        |
 Frog    78 DLYNAMAKEDDHSMLGYT--LSGAMLESRGLRKG-YPV-VANGYSRKAQAYRNAPLTTQRPPLAS 138

  Fly   578 HNDYEYFNDYSVQTHDKNRYHEGRSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQ 642
            ..|..:.||..:.....|.....:            ::.:.:.|::.|..|...|.|       .
 Frog   139 LQDSNFLNDADMVMSFVNLVERDK------------DFSHNRRHYKEFRFDLTQIPH-------G 184

  Fly   643 EIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNT 707
            |.:|.||    :|.|:    ...|.|..::.|.|...|| |:         :.:....:..||:|
 Frog   185 EAVTAAE----FRIYK----DRSNNRFGNETLKISIYQI-IK---------DYSNRDADLFLLDT 231

  Fly   708 KRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFRASFQVDPKNLGWQKFDLTDTIREWYGH 772
            :|                                        |...::||..||:|.|...|..:
 Frog   232 QR----------------------------------------VQTYDVGWLVFDITVTSNHWVIN 256

  Fly   773 TSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVLH-------------TES 824
            ..:.....|...|..|...|:   :::.|.|..    .....:||||..             |.:
 Frog   257 PQNNLGLQLCAETSDGRSVSV---KSAGLIGRH----GPQSKQPFLVAFFKASEVLLRSVRATNT 314

  Fly   825 SRTRRVRRRAV------------DCGGALNGQCCKE-SFYVSFKALGWDDWIIAPRGYFANYCRG 876
            .:.::.|.::.            |...:...|.||: ..||||:.|||:||||||.||.|.||.|
 Frog   315 KKKKQDRNKSTTSHDASRMPSIGDYNTSEQKQACKKHELYVSFRDLGWEDWIIAPEGYAAFYCDG 379

  Fly   877 DCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGM------------------RPCCAPIKFSSMSLI 923
            :|  ||       ..:||          ||..                  :|||||.|.:::|::
 Frog   380 EC--SF-------PLNAH----------MNATNHAIVQTLVHLMFPDHVPKPCCAPTKLNAISVL 425

  Fly   924 YYGD-DGIIKRDLPKMVVDECGC 945
            |:.| ..:|.:....|||..|||
 Frog   426 YFDDSSNVILKKYRNMVVRSCGC 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 42/119 (35%)
bmp5XP_004914553.1 TGFb_propeptide 27..298 CDD:459906 67/370 (18%)
TGF_beta_BMP5 337..449 CDD:381665 46/131 (35%)

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