DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actbeta and inhbc.1

DIOPT Version :9

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:XP_002939470.1 Gene:inhbc.1 / 100493888 XenbaseID:XB-GENE-494358 Length:367 Species:Xenopus tropicalis


Alignment Length:609 Identity:118/609 - (19%)
Similarity:193/609 - (31%) Gaps:277/609 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 SNNNFNKKTNQPHNNIAPSDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIWETIYRVDGGRMI 412
            |.....||:..|...: ...||.:|..|:|||.||.|..:||::||:|:..:...:.|:...:..
 Frog    24 STQGLTKKSQCPSCGV-QDKEVMMELAKQQILQKLHLKERPNITHPVPRGAVANALRRLHLNKPR 87

  Fly   413 PNNAFGSSGKNLDQKTIKLRAFASPGSHLFNGRGGRTDQRSERDPSHHKYRSPFDFTFNISKNNV 477
            ....|||.  |.|..|                ....|||:|                        
 Frog    88 MEGLFGSI--NWDSNT----------------ENTETDQQS------------------------ 110

  Fly   478 YGKVLRNRSLERIDKKNSFLNGWTENRQLKINSQIASMPIELKSHHNSSPKELKSGAVRKVNGIN 542
                                                                             
 Frog   111 ----------------------------------------------------------------- 110

  Fly   543 GTQMNENALKKSTYPIDINHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEGRSSIGYQ 607
                         |.|                 :|..:.||.|:.|             :::.:|
 Frog   111 -------------YEI-----------------ISFAETEYSNEIS-------------TTLNFQ 132

  Fly   608 PAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQ 672
                             |..|.|...|                        :|            
 Frog   133 -----------------FTRDREQSTH------------------------VL------------ 144

  Fly   673 KLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTS--INITE 735
                   |.|        ||:          .....|   .::.:..|::::.|.:.|  |.|:|
 Frog   145 -------QAH--------LWL----------FFKANR---TSQQNETIRLYLVQEANSRRILISE 181

  Fly   736 KGIDKAIIFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSK 800
            |            .::|:..|||.|.|..|::.:: ...::.|:|.::|.||         |.:.
 Frog   182 K------------LIEPRWTGWQTFSLKSTLQAFF-DGGNKSLQLELNCEGC---------QDAP 224

  Fly   801 LRGNSSDYLSTNPNRPFLV----LHTESSRTRRVRRRAVDCGGALNGQCCKESFYVSFKALGWDD 861
            :..|.:|     .::||||    :|.:|   ....:|:::|....| .||::.:||.||.:||:|
 Frog   225 VLINLND-----SHQPFLVAQAKVHEQS---HHATKRSLNCDQNSN-LCCRKDYYVDFKDIGWND 280

  Fly   862 WIIAPRGYFANYCRGDC----TGSFRTPDTFQTFHAHFIEEYRKMGLMNGMRPCCAPIKFSSMSL 922
            |||.|.||..|||.|.|    .|:   |....:||.......:...:.|.:..||.|.|...:|:
 Frog   281 WIIKPEGYQINYCMGLCPMHIAGA---PGMAASFHTTVFNLIKANNIQNAVNSCCVPTKRRPLSM 342

  Fly   923 IYYG-DDGIIKRDLPKMVVDECGC 945
            :|:. ::.|:|.|:..|:|:.|||
 Frog   343 LYFDRNNNILKTDIADMIVEACGC 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078 24/138 (17%)
TGF_beta 843..945 CDD:278448 37/106 (35%)
inhbc.1XP_002939470.1 TGFb_propeptide 41..239 CDD:366248 69/455 (15%)
TGF_beta_INHBC_E 264..367 CDD:381676 39/106 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 118 1.000 Domainoid score I5766
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 190 1.000 Inparanoid score I3759
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385831at2759
OrthoFinder 1 1.000 - - FOG0000887
OrthoInspector 1 1.000 - - otm48117
Panther 1 1.100 - - O PTHR11848
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X477
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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