DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actbeta and bmp16

DIOPT Version :10

Sequence 1:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001165247.1 Gene:bmp16 / 100329171 ZFINID:ZDB-GENE-100115-1 Length:416 Species:Danio rerio


Alignment Length:424 Identity:96/424 - (22%)
Similarity:151/424 - (35%) Gaps:126/424 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   620 GHHESFADDHENIDH--EDFFGNTQEIITFAEEGTQ------------------YR----QYRIL 660
            ||.|..:..|..:|.  |....:|.:.:.....|.|                  ||    ||.::
Zfish    20 GHQEGPSQTHGKLDSLLEPSLAHTIQNLLLTRLGLQSHPNPSTKAQVPQYLLDLYRFHTQQYHLI 84

  Fly   661 ---EFSAQNRRV----------------PS----QKLSIRSAQIHIRIDKPHSLWIEKAKSLPEK 702
               |||..::.|                ||    ||.::....|...:.   |:..|::....|.
Zfish    85 EDPEFSYPSKHVQGANTVRCFHHTDSPTPSLPEEQKTTVDGIHIGFNLS---SIPSEESVVSAEL 146

  Fly   703 HLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIF--------RASFQVDPKNLGWQK 759
            .||:.    |::...|...:::.....|        .|.|:.        |.|.|:      |:.
Zfish   147 RLLHE----GSSGGSHVASLYLSNHDPS--------SKPILLHSRQLTRDRKSAQL------WET 193

  Fly   760 FDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSKLRGNSSDYLSTNP----NRPFLVL 820
            |.|...:.:....|| ..|..::|... ....|..|.:...||...|. |...|    .||.||.
Zfish   194 FPLDREVFQNLSKTS-GSLSFILDVIP-DSNSSSTLPKDRHLRVRRST-LQDGPTWERQRPLLVT 255

  Fly   821 HT--------------ESSRTR----------------------RVRRRAVDCGGALNGQCCKES 849
            ::              :|||:|                      |..|||.........:|.:..
Zfish   256 YSHDGRSEPFVNLNKRKSSRSRSRWTRFKGDRGQGSDWNERRVKRNNRRAAKLKRLSRARCRRHP 320

  Fly   850 FYVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGM--RPCC 912
            .||.||.:||:.|||||.||.|.:|.|:|  .|...|...:.....::..  :..:||.  ||||
Zfish   321 LYVDFKDVGWNKWIIAPSGYDAFFCLGEC--RFPLADHMNSSSHAMVQTL--VSSVNGAVPRPCC 381

  Fly   913 APIKFSSMSLIYYG-DDGIIKRDLPKMVVDECGC 945
            .|...|.::|::.. ::.::.::...|||:.|||
Zfish   382 VPTALSPIALLFLDQEERVVLKNYQDMVVEGCGC 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 33/102 (32%)
bmp16NP_001165247.1 TGFb_propeptide 44..256 CDD:480997 46/235 (20%)
TGF_beta_SF 314..416 CDD:477357 35/106 (33%)

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