Protein Alignment sv and pax1a

DIOPT Version :10

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: XP_068070533.1
• Gene: pax1a / 564359
• ZFINID: ZDB-GENE-070112-182
• Length: 359
• Species: Danio rerio
• Alignment Length: 378
• Identity: 131/378 - (34%)
• Similarity: 184/378 - (48%)
• Gaps: 80/378 - (21%)

  Fly   176 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKAG 240
            :|.|||||||||||||||:.:|.||||||..|:||||||||||||||||||||:||.||||...|
Zfish    10 YGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPG 74

  Fly   241 VIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNKAA-- 303
            .||||||:|.||.||..|.:||:.:|.:|||||||||||:.:|.:.||||||||:||:|||..
Zfish    75 AIGGSKPRVTTPNVVKNIRDYKQSDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKIGNL 139

  Fly   304 ------EKAK-----------HVHHHQQHHVSQSLG------------GGHIATESVDSSTGTIG 339
                  |..|           |::.:...:.....|            |||::......|..|:.
Zfish   140 SQPNPYENGKQAPPQSSLSYNHIYPYSYPNAMSPSGTKMSSPPGVPVTGGHVSISRGWPSAHTVS 204

  Fly   340 EP------QPPTSNSSANSVNTNVSASASVHASIPTSGTD-----SVQVSVGHINANSNETTHIN 393
            ..      ..||:.:||......:.......|:..:.|.:     |:...:.:...:|..::::.
Zfish   205 NILGIRAFMDPTAIASAEGYAPKMEDWGVNRATFQSHGVNGIDKSSIDADIKYPQPSSTLSSYVP 269

  Fly   394 STAEQRTTGYSI-NGILG--IQHGHHSHNNNNNSSVNNNNNTESSCKRKRIEAHDENHDTNIHSD 455
            :.|...:..|.: :|..|  :..|||.  ....:|:.:.....:.            |.::|||.
Zfish   270 ACAYSPSNQYGVYSGPAGGYVSPGHHW--QAQGTSLTHPGGGVAM------------HPSDIHSS 320

  Fly   456 N------DDGKRQRMSTYSGDQLYTNIWSGKWCIKDDHKLLAELGNLTASTGN 502
            .      .||.|:..|..|               |..|:.|:.:..|:.||.:
Zfish   321 MAFKHAVRDGDRKPPSPLS---------------KQQHEALSGIHGLSLSTSS 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	88/122 (72%)
pax1a	XP_068070533.1	PAX	9..136	CDD:238076	90/125 (72%)