DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and PROP1

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_006252.4 Gene:PROP1 / 5626 HGNCID:9455 Length:226 Species:Homo sapiens


Alignment Length:172 Identity:32/172 - (18%)
Similarity:58/172 - (33%) Gaps:74/172 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 KRQRMSTYSGDQL-----------YTNIWSGKWCIKD----------------------DHKLLA 491
            :|:..:|:|..||           |.:||:.:...:|                      :..||.
Human    69 RRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQERSLLQ 133

  Fly   492 ELGNLTASTGN--------CPATY-----------YEASNGFSTTPISGSGATASGNDTSMLYDS 537
            .|.:|:.:..:        ||.:|           :..|:...:.|.:| ||.|..:        
Human   134 PLAHLSPAAFSSFLPESTACPYSYAAPPPPVTCFPHPYSHALPSQPSTG-GAFALSH-------- 189

  Fly   538 ITTISQTQSSIYTPAIGPSIGTGSL-----TPLVPISMHEMK 574
                   ||..:.|.:.|: ..|.|     .|::|:|:...|
Human   190 -------QSEDWYPTLHPA-PAGHLPCPPPPPMLPLSLEPSK 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645
PROP1NP_006252.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 1/5 (20%)
Homeodomain 70..126 CDD:459649 9/55 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..226 8/29 (28%)
Blue background indicates that the domain is not in the aligned region.

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