DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sv and PAX5

DIOPT Version :9

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_057953.1 Gene:PAX5 / 5079 HGNCID:8619 Length:391 Species:Homo sapiens


Alignment Length:471 Identity:186/471 - (39%)
Similarity:218/471 - (46%) Gaps:151/471 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 SGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGS 236
            |..|||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||||||
Human    13 SRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS 77

  Fly   237 FKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNK 301
            .|.|||||||||||||.||:.||.|||:||||||||||||||||.:|..|.||||||||||:|.|
Human    78 IKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTK 142

  Fly   302 AAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHAS 366
            .                                      .|||           |....||.|:.
Human   143 V--------------------------------------QQPP-----------NQPVPASSHSI 158

  Fly   367 IPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNN 431
            :.|.....|. ||...:|.|:               |||:|||||          .:.|.:.|  
Human   159 VSTGSVTQVS-SVSTDSAGSS---------------YSISGILGI----------TSPSADTN-- 195

  Fly   432 TESSCKRKRIEAHDENHDTNIHS-DNDDGKRQRMSTYSGD----------------QLYTNIWSG 479
                 ||||.|...|:...|.|| ...|..|::|   .||                |.|::|::.
Human   196 -----KRKRDEGIQESPVPNGHSLPGRDFLRKQM---RGDLFTQQQLEVLDRVFERQHYSDIFTT 252

  Fly   480 KWCIK----DDHKLLAEL--------GNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTS 532
            ...||    .::..:|.|        .||.:.|   ||....:..|..:.||      .:|.|  
Human   253 TEPIKPEQTTEYSAMASLAGGLDDMKANLASPT---PADIGSSVPGPQSYPI------VTGRD-- 306

  Fly   533 MLYDSITTISQTQSSIYTPAIGPSIGTGS-----LTPLVPIS-------MHEMKLSANSIQEQTV 585
                    ::.|....|.|.:.|: |.||     ||.:||.|       .|....|.|.......
Human   307 --------LASTTLPGYPPHVPPA-GQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRFPN 362

  Fly   586 P-----PFYTALAFDG 596
            |     |:|.:.|..|
Human   363 PGLLGSPYYYSAAARG 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 109/123 (89%)
PAX5NP_057953.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 5/7 (71%)
PAX 16..140 CDD:128645 109/123 (89%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 53/55 (96%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 36/47 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..218 16/52 (31%)
Pax2_C 279..389 CDD:403565 30/120 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 231 1.000 Domainoid score I2439
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3058
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D268681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41583
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5005
SonicParanoid 1 1.000 - - X862
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.960

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