DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and OTX2

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_068374.1 Gene:OTX2 / 5015 HGNCID:8522 Length:297 Species:Homo sapiens


Alignment Length:130 Identity:36/130 - (27%)
Similarity:58/130 - (44%) Gaps:27/130 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 TTP---ISGSGATASGNDTSMLYDSITTISQTQS--SIYTPAIGPSIGTGSLTPLV-PISMHEMK 574
            |:|   :|....| ||..|.....|:.||:.:.:  ||::||        |::||. |:|     
Human   123 TSPAREVSSESGT-SGQFTPPSSTSVPTIASSSAPVSIWSPA--------SISPLSDPLS----- 173

  Fly   575 LSANSIQEQTVPPFYT-ALAFDGNYTSMTSL---ENCSSLVGQEHIVMPESSDSNTLCPISTRIV 635
             :::|..:::.|..|| |..:...|...||.   .:|.|.:...|..:|  ....||.|:.|..|
Human   174 -TSSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSYLTPMHHQLP--GPGATLSPMGTNAV 235

  Fly   636  635
            Human   236  235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645
OTX2NP_068374.1 Homeodomain 47..102 CDD:459649
TF_Otx 161..242 CDD:427350 24/91 (26%)
Blue background indicates that the domain is not in the aligned region.

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