DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and OTX1

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_055377.1 Gene:OTX1 / 5013 HGNCID:8521 Length:354 Species:Homo sapiens


Alignment Length:275 Identity:58/275 - (21%)
Similarity:95/275 - (34%) Gaps:68/275 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 TTPI-SGSGATASGNDT-SMLYDSITTISQTQSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSAN 578
            ::|: ..||:.:||..| ..:..|.::.|...||...||...:.|.|. .|:...|......:::
Human   112 SSPVRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAGLGG-NPVAAASSLSTPAASS 175

  Fly   579 SIQEQTVPPFYTALAFDGNYTSMTSLENCSSLVGQEHIVMPESSDSNTLCPISTRIVPDITETNS 643
            .....::.|        |:..:..|:..            |.::.|||.|...:......|...|
Human   176 IWSPASISP--------GSAPASVSVPE------------PLAAPSNTSCMQRSVAAGAATAAAS 220

  Fly   644 TRVKEPLTNSDGCSEDNNKEPEKSNS----SQSSDHIASPHLHHIGEEQLRGNRRSNLNASTHPS 704
                .|::...|.|.... .|..|:|    ...|.::|..|.||                  ||.
Human   221 ----YPMSYGQGGSYGQG-YPTPSSSYFGGVDCSSYLAPMHSHH------------------HPH 262

  Fly   705 SLIPLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVLPSFNHYSAGCSSVVPGSDYAYNP 769
            .|.|:.||..:...:.:|..:..     ||.:.|.:.     ...:|:..|..    ||..|:|.
Human   263 QLSPMAPSSMAGHHHHHPHAHHP-----LSQSSGHHH-----HHHHHHHQGYG----GSGLAFNS 313

  Fly   770 A----YTQYGGAYGS 780
            |    |.:.|.|..|
Human   314 ADCLDYKEPGAAAAS 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645
OTX1NP_055377.1 Homeodomain 39..95 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 9/33 (27%)
TF_Otx 178..274 CDD:427350 27/138 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..305 14/75 (19%)
Blue background indicates that the domain is not in the aligned region.

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