Sequence 1: | NP_524633.3 | Gene: | sv / 43825 | FlyBaseID: | FBgn0005561 | Length: | 844 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006239325.1 | Gene: | Pax7 / 500574 | RGDID: | 1564360 | Length: | 505 | Species: | Rattus norvegicus |
Alignment Length: | 643 | Identity: | 165/643 - (25%) |
---|---|---|---|
Similarity: | 237/643 - (36%) | Gaps: | 252/643 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239
Fly 240 GVIGGSKPK-VATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPS--VSSINRIVRNK 301
Fly 302 AAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHAS 366
Fly 367 IPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNN 431
Fly 432 TESS----CKRKR---------------IEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIW 477
Fly 478 ----SGKWCIKDDHKLLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDS- 537
Fly 538 --ITTISQT-QSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYT 599
Fly 600 SMTSLENCSSLVGQEH-------IVMPESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCS 657
Fly 658 EDNNKEPEKSNSSQSSDHIASPHLHHIGEEQLRGNRRSNLNASTHPSSLIPLQPSGGSSLLNINP 722
Fly 723 S-ENRSDVELNLSNNVGLYSTPTVLPSFNHYSAGCSSVVPGSDYAYNPA----YTQYG 775 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sv | NP_524633.3 | PAX | 175..299 | CDD:128645 | 86/126 (68%) |
Pax7 | XP_006239325.1 | PAX | 34..161 | CDD:128645 | 86/126 (68%) |
Homeobox | 220..274 | CDD:395001 | 6/58 (10%) | ||
Pax7 | <354..385 | CDD:403540 | 6/30 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0849 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000011 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |