Protein Alignment sv and pax3

DIOPT Version :9

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: XP_012825755.1
• Gene: pax3 / 448464
• XenbaseID: XB-GENE-482740
• Length: 486
• Species: Xenopus tropicalis
• Alignment Length: 609
• Identity: 167/609 - (27%)
• Similarity: 241/609 - (39%)
• Gaps: 178/609 - (29%)

  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239
            |.|.||||||||:||||||:.:|.:|||:||:|:|||.||||||||||||||||.||.||||.:.
 Frog    35 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 99

  Fly   240 GVIGGSKPK-VATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRN--- 300
            |.||||||| |.||.|...|..:||:||.||:|||||:||.:.:|.::.|||||||:||:|:
 Frog   100 GAIGGSKPKQVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFG 164

  Fly   301 KAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHA 365
            |..|:...:...:|....:.      |..|:|   |.:.|..|.:..|...|       ......
 Frog   165 KGDEEDIELDRKEQEESEKR------AKHSID---GILRERAPASPESEEGS-------DIDSEP 213

  Fly   366 SIPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNN 430
            .:|..              .....:....||||
 Frog   214 DLPLK--------------RKQRRSRTTFTAEQ-------------------------------- 232

  Fly   431 NTESSCKRKRIE-AHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIW----SGKWCIKDDHKLL 490
                   .:.:| |.:..|..:|::..:..:|.:::     :....:|    ..:|      :..
 Frog   233 -------LEELERAFERTHYPDIYTREELAQRAKLT-----EARVQVWFSNRRARW------RKQ 279

  Fly   491 AELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSI-TTISQTQSSIYTPAIG 554
            |....|.|.....|..:..|:  ....|      |...::||....|| ..:|...::::.|
 Frog   280 AGANQLMAFNHLIPGAFPPAA--MPALP------TYQLSETSYQPTSIPQAVSDPSNTVHRP--- 333

  Fly   555 PSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYTSMTSLENCSSLVGQEHIVMP 619
                    .||.|.|:|:..|.:|       |...:|..........:|..:.         .:|
 Frog   334 --------QPLPPSSVHQSSLPSN-------PESSSAYCLPSGRHGFSSYTDS---------FVP 374

  Fly   620 ESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSSDHIASPHLHHI 684
            .|..||   |::    |.|....|.:|...|||..|...    :|:       :|:..||
 Frog   375 PSGPSN---PMN----PAIGNGLSPQVMGLLTNHGGVPH----QPQ-------TDYALSP----- 416

  Fly   685 GEEQLRGNRRSNLNASTHPSSLIPLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVLPSF 749
                        |.....|       |:..|:..:......:|...|:.|.:   |..||
 Frog   417 ------------LTGGLEP-------PTAVSASCSQRLEHMKSLDSLSTSQS---YCPPT----- 454

  Fly   750 NHYSAGCSSVVPGSDYAYNPAYTQ 773
              ||....|:.|.:.|.| |.|.|
 Frog   455 --YSTSGYSMEPVTGYQY-PQYGQ 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	84/124 (68%)
pax3	XP_012825755.1	PAX	35..162	CDD:238076	85/126 (67%)
		Homeobox	224..278	CDD:365835	11/103 (11%)
		Pax7	349..393	CDD:372070	12/66 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910