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Protein Alignment sv and mix1
DIOPT Version :9
Sequence 1: | NP_524633.3 |
Gene: | sv / 43825 |
FlyBaseID: | FBgn0005561 |
Length: | 844 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_988848.1 |
Gene: | mix1 / 394439 |
XenbaseID: | XB-GENE-485898 |
Length: | 357 |
Species: | Xenopus tropicalis |
Alignment Length: | 168 |
Identity: | 39/168 - (23%) |
Similarity: | 59/168 - (35%) |
Gaps: | 25/168 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 HPHILHSTQEETLNTSTGQLEHDSQHLQQHHLTHHQQQDVSPTLHNLQNTRTGD-SLSTTINTNQ 90
||......|.:.:..|.....|.||....: .....|||.....|.....|. .|..|.:...
Frog 181 HPMATARAQAQPMKDSQANKFHQSQGFLPY---PDSSCDVSRQRFLLSQATPGTYHLPQTSSNIY 242
Fly 91 NQHGHQHLSGSN---MYTSSQMEDKSKANKYDE-------YSSRTLSNISD---ANTTPSANNFI 142
||:|..|:...| :|| ..||.....::..| ||::|..||.. .:||.|.::.:
Frog 243 NQNGKPHIPLWNQQPLYT-DMMEKVLDLSRRPEQMPVQPMYSTQTHKNIKSVVHGSTTLSHHSHM 306
Fly 143 TQSQGIEWITAMNDIQNGAEDSHSSQGSISGDGHGGVN 180
: :.|..|..|.......:.|.:|.....||:
Frog 307 S-------LFANQDPCNMPTTQGGTYGHVSPISDSGVS 337
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sv | NP_524633.3 |
PAX |
175..299 |
CDD:128645 |
2/6 (33%) |
mix1 | NP_988848.1 |
Homeobox |
90..143 |
CDD:278475 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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