Protein Alignment sv and gsb-n

DIOPT Version :10

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Alignment Length: 548
• Identity: 153/548 - (27%)
• Similarity: 226/548 - (41%)
• Gaps: 137/548 - (25%)

  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239
            |.|.||||||||:||||||:.:|.:|||:|.:|||||.||||||||||||||||:||.||||.:.
  Fly    20 GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRP 84

  Fly   240 GVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVR--NKA 302
            ||||||||||.:|.:...|...::|||::|:||||::|:.|...   :.||.|||:|::|  ::.
  Fly    85 GVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFA---DPPSTSSISRLLRGSDRG 146

  Fly   303 AEKAKHVHHHQQHHVSQSLGGGHIATESVDSS-TGTIGEPQPPTSNSSANSVNTNVSASASVHAS 366
            :|..:     :.:.::..|||.       ||. :.|..||..|.......| .|..:|.......
  Fly   147 SEDGR-----KDYTINGILGGR-------DSDISDTESEPGIPLKRKQRRS-RTTFTAEQLEALE 198

  Fly   367 IPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNN 431
            ...|.|....|      ....|.....:..|.|...:..|
  Fly   199 RAFSRTQYPDV------YTREELAQTTALTEARIQVWFSN------------------------- 232

  Fly   432 TESSCKRKRIEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCIKDDHKLLAELGNL 496
                 :|.|:..|....::.:...|           ||.   :|:..|           ..|...
  Fly   233 -----RRARLRKHSGGSNSGLSPMN-----------SGS---SNVGVG-----------VGLSGA 267

  Fly   497 TASTGNCPATYYEASNGFSTTPISGSGATASG-NDTSMLYDSITTISQTQSSIYTPAIGPSIGTG 560
            ||..|..|......: |:|..|  |:.||.:| ||                .::..|..||....
  Fly   268 TAPLGYGPLGVGSMA-GYSPAP--GTTATGAGMND----------------GVHHAAHAPSSHHS 313

  Fly   561 SLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYTSMTSLENCSSLVGQEHIVMPESSDSN 625
            :.|.......|......:.:|......|....|..|::.|       .:...|::
  Fly   314 AATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPGHFGS-------QNYYHQDY---------- 361

  Fly   626 TLCPISTRIVPDITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSSDHIASPHLHHIGEEQL- 689
                 |...:.|.::..:..|.: ::.|...|::.:|....||.||::.|.|:.:..|:.:.||
  Fly   362 -----SKLTIDDFSKLTADSVSK-ISPSLHLSDNYSKLEAPSNWSQAAYHAAANYNAHVAQHQLN 420

  Fly   690 -------RGNRRSNLNASTHPSSLIPLQ 710
                   .||..|   |.:||   :|.|
  Fly   421 DYAAAAAHGNPAS---AYSHP---LPTQ 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	76/123 (62%)
gsb-n	NP_523862.1	HTH_CRP	20..141	CDD:481199	76/123 (62%)
		Homeodomain	183..239	CDD:459649	12/92 (13%)