DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and Poxn

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster


Alignment Length:192 Identity:42/192 - (21%)
Similarity:72/192 - (37%) Gaps:44/192 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYRKTIVVLAICALLFVSS------------IDCK----KVAKDKKGGKAEKAEKVKKVKAEKIV 49
            |.|.::.||...||..:|:            .:|:    |..:|.|...||.|:: :....|..:
  Fly     1 MRRLSVWVLLGLALFTLSTAGLQVQAETPTEYECRPYIEKAIQDLKSESAEAADE-ENASIEHTI 64

  Fly    50 IVDEPEVVHEAAPEEV---------HHAPEEVEEAEEVVVVKQPVAQKHKISPPKSLKVTSAFET 105
            .|...|.....|.|||         ..|.||:..:|||        |:...:.....:.|...|.
  Fly    65 DVTSQEEEDNTAAEEVSTEETDTAADDATEEITPSEEV--------QEQLFADTTEDEATDNVEA 121

  Fly   106 CKLECRKQRDAVQAADYVE------QLRRELASAQAALDAENAPVVNAHHAQAQHVEPVDNQ 161
            .:   ..:::..:|||..|      :.:.|..:.:|....|..|.|:....|::.| |.:.:
  Fly   122 SE---ETEQEPAEAADSEEGEEEQTEDQEENVTEEAVQSEETEPTVSEEAEQSEEV-PAETE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 28/139 (20%)
Blue background indicates that the domain is not in the aligned region.

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