Protein Alignment sv and Gsc

DIOPT Version :9

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 296
• Identity: 55/296 - (18%)
• Similarity: 91/296 - (30%)
• Gaps: 101/296 - (34%)

  Fly   322 GGGHIATESVDSSTGTI------------------GEPQPPTSNSS-ANSVNTNVSASASVHASI 367
            |||...|.:..|:|..|                  ..|.||.:.|. |..|.||   |.....::
  Fly    10 GGGGGTTTTTPSTTPDIPPSKAKFKITVVSTPSPSPPPTPPPAGSMLAQMVETN---SPPAGYTL 71

  Fly   368 PTSGTD---------SVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNN 423
            ..|.:|         .:..|.|:..|....|..:.::.:....|..:..:|..||..|..:.:..
  Fly    72 KRSPSDLGEQQQPPRQISRSPGNTAAYHLTTAMLLNSQQCGYLGQRLQSVLQQQHAQHQQSQSQT 136

  Fly   424 SSVNNNNNTESSCKRKRIEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCIKDDHK 488
            .|                              :|||.:                ||...::::.:
  Fly   137 PS------------------------------SDDGSQ----------------SGVTILEEERR 155

  Fly   489 LLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSITTISQTQSSIYTPAI 553
                .|...||.....:.......|..|.|..||..:::||...:..:.|
  Fly   156 ----GGAAAASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGI--------------- 201

  Fly   554 GPSIG---TGSLTPLVPISMHEMKLSANSIQEQTVP 586
              |:|   :|:.:|..|.|......:|:.|:.|.||
  Fly   202 --SLGLKRSGAESPASPNSNSSSSAAASPIRPQRVP 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451034
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.930