DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sv and CG32532

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster


Alignment Length:612 Identity:116/612 - (18%)
Similarity:190/612 - (31%) Gaps:216/612 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 HQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSV------NTNVSASASVH------ 364
            |:.....||..||        ..:|..|.|.|.....::..|      |:|..|:|...      
  Fly    62 HKLDFKHQSCAGG--------PGSGGAGGPGPGGGGGASGVVVVGGTSNSNNPAAAQQQQQQQQQ 118

  Fly   365 ----------ASIPTSGTDS-VQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSH 418
                      .:.|::|::| |.:|:.|.:|::   :|.:|:....:..::    |.|.||||..
  Fly   119 QQQQQQQQSGGNNPSNGSNSAVALSLAHPHAHA---SHAHSSHAHGSHAHA----LAIAHGHHGL 176

  Fly   419 NNNNNSSVNNNNNTESSCKRKRIEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCI 483
            ..:...........:...::::.:|........:.|.....::|:.......|.           
  Fly   177 LPSVVPQQQQQQQQQQQQQQQQQQAQQLPPGVGVASPLQQQQQQQQQQQQQQQQ----------- 230

  Fly   484 KDDHKLLAELGNLTAST-----GNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSITTISQ 543
            :...:.|...|.::|.|     ||.|     :|:|..|..:|.:.|.|:         :....|.
  Fly   231 QQQQQQLINNGGVSAGTPTLLIGNGP-----SSSGAGTGSVSAAAAAAA---------AAAAASS 281

  Fly   544 TQSSIYTPAIGP-SIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYT-ALAF----DGNYTSMT 602
            :.||:  |.:.| |:|   |:|         :.||:|.|....|..:: .|.|    .|...||.
  Fly   282 SSSSL--PHVAPHSLG---LSP---------QSSADSQQFNIFPAIFSRQLNFSAGGQGGKLSMD 332

  Fly   603 SLENCSSLVG----------QEHIVMPE---------------------SSDSNTLCPISTRIVP 636
            .|.  .:|||          ::|..|..                     .|..|.|..:::    
  Fly   333 ELR--PNLVGGLLGLQQGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGGSHENRLLSLAS---- 391

  Fly   637 DITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSS----------------QSSDHIASPHLHHIG 685
            .:.:|.|     |:|..:..|..:.....|.:|:                .||.|      ||  
  Fly   392 SVQDTRS-----PITTLEKSSSSSLNHQRKCSSTPEDFSALYSGLPTPGMDSSSH------HH-- 443

  Fly   686 EEQLRGNRRSNLNASTHPSSLIPLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVLPSFN 750
                       ..|.|.||.|.....|...:...:.|..|.           ||.:.        
  Fly   444 -----------TPAHTPPSRLSDHTISAEGAFKKLKPEPNS-----------GLSTV-------- 478

  Fly   751 HYSAGCSSVVPGSDYAYNPAYTQYGGAYGSYGYGTGSGLINSSYYYESGQTQSPLTHDLRSPLVA 815
              |||.:|                          .||||  ||....:|.|  |.|....:|...
  Fly   479 --SAGITS--------------------------PGSGL--SSLSQHAGHT--PTTASCPTPARR 511

  Fly   816 TRANSLASAASPGSGSACTKSESSDIF 842
            ....:..........:|..||...||:
  Fly   512 RHRTTFTQEQLAELEAAFAKSHYPDIY 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 5/28 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.