DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and arxa

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_571459.1 Gene:arxa / 30657 ZFINID:ZDB-GENE-990415-15 Length:453 Species:Danio rerio


Alignment Length:464 Identity:93/464 - (20%)
Similarity:143/464 - (30%) Gaps:146/464 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 RDRLLAEAICSQ---DNVPSVSSINRIVRNKAAEKAKHVHHHQQHHVSQSLGG---GHIATESVD 332
            |:|||.:| |..   ...|.||    |.|:|:        :.:....|||..|   .|:|.|.|:
Zfish   105 RERLLDQA-CESLKISQAPQVS----ISRSKS--------YRENAPFSQSDEGQSPEHMAQELVE 156

  Fly   333 SSTGTIGEPQPPTSNSSANSVNTNVSASASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAE 397
            .||....|..........||::.....|......: ..|.|||.:|.|   ::|.|.........
Zfish   157 LSTLKFEEDVVKEEACGDNSLSPKDEESLHNDGDV-KDGEDSVCLSAG---SDSEEGMLKRKQRR 217

  Fly   398 QRT--TGYSINGI-LGIQHGHHSHNNNNNSSVNNNNNTESSCK----------RKRIEAHDENHD 449
            .||  |.|.:..: ...|..|:.............:.||:..:          |||.:|..:.|.
Zfish   218 YRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQAHP 282

  Fly   450 TNIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCIKDDHKLLAELGNLTASTGNCPATYYEASNGF 514
            |.                                      |...|.|.|:.   |.::|.....|
Zfish   283 TG--------------------------------------LPFPGPLAAAH---PLSHYLEGGPF 306

  Fly   515 STTPISGSGATASGNDTSMLYDSITTISQTQSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSANS 579
            ...|             ....:|..|.:...::.: |.:.|...:.:|.|..|:.:.....:|..
Zfish   307 PPHP-------------HPALESAWTAAAAAAAAF-PGLAPPPNSSALPPATPLGLGTFLGTAMF 357

  Fly   580 IQEQTVPPFYTALAFDGNYTSM---TSLENCSSLVGQEHIVMPESSDSNTLCPISTRIVPDITET 641
            .....:.|.:..|     ::||   ||....::|:.|            |..|:.:.:.|...  
Zfish   358 RHPAFIGPTFGRL-----FSSMGPLTSASTAAALLRQ------------TAPPVESPVQPSAA-- 403

  Fly   642 NSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSSDHIASPHLHHIGEEQLRGNRRSNLNASTHPSSL 706
                               ..||..|:||.::|..||      ....||      |.|..|.:.|
Zfish   404 -------------------LPEPPSSSSSTAADRRAS------SIAALR------LKAKEHSAQL 437

  Fly   707 IPLQ--PSG 713
            ..|.  |||
Zfish   438 TQLNILPSG 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 10/27 (37%)
arxaNP_571459.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..75
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..149 9/36 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..212 11/45 (24%)
Homeodomain 216..272 CDD:459649 8/55 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 390..418 8/48 (17%)
OAR 417..435 CDD:461067 8/29 (28%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 421..434 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.

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