Protein Alignment sv and pax3a

DIOPT Version :9

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_571352.1
• Gene: pax3a / 30532
• ZFINID: ZDB-GENE-980526-52
• Length: 509
• Species: Danio rerio
• Alignment Length: 578
• Identity: 161/578 - (27%)
• Similarity: 231/578 - (39%)
• Gaps: 175/578 - (30%)

  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239
            |.|.||||||||:||||||:.:|.:|||:||:|:|||.||||||||||||||||.||.||||.:.
Zfish    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98

  Fly   240 GVIGGSKPKVATPPVVD-AIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNKAA 303
            |.|||||||.:|.|.|: .|..||||||.||:|||||:||.:.||.::||||||||:|::|.|
Zfish    99 GAIGGSKPKQSTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDGICDRNNVPSVSSISRMLRCK-- 161

  Fly   304 EKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHASIP 368
                             .||.....|
Zfish   162 -----------------FGGNGDEDE--------------------------------------- 170

  Fly   369 TSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNNTE 433
                |..:|....|..|.....|            ||:||||.:..|    ::..|.|::.....
Zfish   171 ----DDDEVEKREIEENERRAKH------------SIDGILGDRSSH----SDEGSDVDSEPGLP 215

  Fly   434 SSCKRKRI-------------EAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIW----SGKW 481
            ...|::|.             .|.:..|..:|::..:..:|.:::     :....:|    ..:|
Zfish   216 LKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLT-----EARVQVWFSNRRARW 275

  Fly   482 CIKDDHKLLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSITTISQTQS 546
                  :..|....|.|.....|       .||..:.:| |.......|:.....||:.:|:..|
Zfish   276 ------RKQAGANQLMAFNHLIP-------GGFPPSAMS-SLQPYQLADSPYPPSSISQVSEQPS 326

  Fly   547 SIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYTSMTSLENCSSLV 611
            :::.|           .||.|.|:|:..|.:....::....:..:   .|.:......:...:..
Zfish   327 TVHRP-----------QPLPPTSVHQSGLGSGPGAQEGSSAYCLS---SGRHGFSGYSDGYVAAP 377

  Fly   612 GQEHIVMPESSD---SNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSSQ-- 671
            |..:.|.|..|:   |..:..::...||.  :..|.....|||   |..|.:...|...:|||
Zfish   378 GHANPVNPSISNGLPSQVMGLLNPGAVPH--QPQSDFALSPLT---GGLEPSTGMPASCHSSQRL 437

  Fly   672 ----------------------------SSDHIASPHLHHIGEEQLRGNRRSNLNAST 701
                                        |.||:||......|:        |.:|.||
Zfish   438 EALPGLPSMPALPSSQSYCPSSYSSPGYSVDHVASYQYSQYGQ--------SKVNTST 487

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	86/124 (69%)
pax3a	NP_571352.1	PAX	34..159	CDD:128645	86/124 (69%)
		Homeobox	223..276	CDD:278475	6/63 (10%)
		Pax7	350..394	CDD:289156	5/46 (11%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0849
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.810