Protein Alignment sv and otx1

DIOPT Version :10

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_571325.2
• Gene: otx1 / 30500
• ZFINID: ZDB-GENE-980526-400
• Length: 323
• Species: Danio rerio
• Alignment Length: 219
• Identity: 51/219 - (23%)
• Similarity: 88/219 - (40%)
• Gaps: 46/219 - (21%)

  Fly   499 STGNCPATYYEASNGFSTTPISGSGATASG----NDTSMLYDSITTISQTQSSIYTPAIGPSIGT 559
            |||:      |:|..|:...:|.:|:::|.    |:|.:...| |:|| |.|||::|||.|....
Zfish   118 STGS------ESSGQFTPPAVSSAGSSSSSSSSTNNTGICSTS-TSIS-TVSSIWSPAISPGSAP 174

  Fly   560 GSLT---PLVPISMHEMKLSANSIQEQTVP-PFYTALAFDGNYT----SMTSLENCSSLVGQEHI 616
            .|::   |:.|.:...|:.|.:.....|.| |:.....:...|.    |..|..:|.|.:...|
Zfish   175 PSVSLPEPVAPSNTSCMQRSVSGTASSTYPMPYNQTTGYSQGYPTPSGSYFSGVDCGSYLAPMH- 238

  Fly   617 VMPESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSEDNNKEPEKS-----NSSQSSDHI 676
               .....:.|.|::...:|       |.....::.|.|....::.:....     |||...|:
Zfish   239 ---SHHHPHQLSPMTASSMP-------THPHHHISQSSGHHHHHHHQAYSGTGLAFNSSDCLDY- 292

  Fly   677 ASPHLHHIGEEQLRGNRRSNLNAS 700
                     :||...:.:.|.|.:
Zfish   293 ---------KEQTASSWKLNFNTT 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645
otx1	NP_571325.2	Homeodomain	39..95	CDD:459649
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	91..155		12/43 (28%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	168..204		8/35 (23%)
		TF_Otx	172..258	CDD:427350	18/96 (19%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	239..277		6/44 (14%)