Protein Alignment sv and Alx4

DIOPT Version :10

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_001100023.1
• Gene: Alx4 / 296511
• RGDID: 1310201
• Length: 399
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 44/215 - (20%)
• Similarity: 77/215 - (35%)
• Gaps: 53/215 - (24%)

  Fly   262 KRENPTMF-AWEIRDRLLAEAICSQDNVPSVSSINRIV--------------RNKAAEKAKHVHH 311
            ||.|.|.| ::::.:   .|.:..:.:.|.|.:..::.              :|:.|:..|....
  Rat   202 KRRNRTTFTSYQLEE---LEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERF 263

  Fly   312 HQQHHVSQSLGGGHIATE------SVDSSTGTIGEPQPPTSNSSANSVNT------NVSASASVH 364
            .|...|..     |.:|.      :...:...|..|....:|.:|:.|..      .|.|..|.|
  Rat   264 GQMQQVRT-----HFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPACMSPH 323

  Fly   365 ASIPTSGTDSVQ--VSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVN 427
            |..|.||..||.  :||....::..: ||:.          |:.|..||..|.:.:..|...
  Rat   324 AHPPGSGASSVSDFLSVSGAGSHVGQ-THMG----------SLFGAAGISPGLNGYEMNGEP--- 374

  Fly   428 NNNNTESSCKRKRIEAHDEN 447
              :...||....|::|.:.:
  Rat   375 --DRKTSSIAALRMKAKEHS 392

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	8/51 (16%)
Alx4	NP_001100023.1	Homeodomain	203..259	CDD:459649	9/58 (16%)
		OAR	375..393	CDD:461067	4/18 (22%)