Protein Alignment sv and Prop1

DIOPT Version :10

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_705891.1
• Gene: Prop1 / 266738
• RGDID: 628759
• Length: 223
• Species: Rattus norvegicus
• Alignment Length: 176
• Identity: 35/176 - (19%)
• Similarity: 58/176 - (32%)
• Gaps: 50/176 - (28%)

  Fly   187 VNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKAGVIGGSKPKVA- 250
            |.||.||                      :.:.:.|.:...:.|..||....:|. |..:||:.
  Rat    17 VCGRSLP----------------------ESQAASGTLISTVDRSPETSKRLSGT-GLGRPKLCP 58

  Fly   251 ---------------TPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRN 300
                           .|..:..:.:....|.....| :|:.|      :||...|.:.|....:|
  Rat    59 QRGRPHSRRRHRTTFNPAQLGQLESAFGRNQYPDIW-VREGL------AQDTGLSEARIQVWFQN 116

  Fly   301 KAAEKAKHVHHHQQ--HHVSQSLGGGHIATESVDSSTGTIGEPQPP 344
            :.|::.|......|  .|:|.:...|.::..|....|.|  .|.||
  Rat   117 RRAKQRKQERSLLQPTAHLSPATFSGFLSESSPYPYTYT--TPPPP 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	22/127 (17%)
Prop1	NP_705891.1	Homeodomain	67..123	CDD:459649	11/62 (18%)