DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and eyg-1

DIOPT Version :9

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_496116.1 Gene:eyg-1 / 190204 WormBaseID:WBGene00013147 Length:314 Species:Caenorhabditis elegans


Alignment Length:286 Identity:78/286 - (27%)
Similarity:115/286 - (40%) Gaps:64/286 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 SHGCVSKILSRYYE------TGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLL 278
            :|..:.|:..|..:      :|:..|....|:|||||||.||..|..|||:|||:||||||::|:
 Worm    18 AHNTMGKMTRRTSQSDGGKPSGNSNAAGGAGTKPKVATPQVVAKIEQYKRDNPTIFAWEIREKLI 82

  Fly   279 AEAICSQDNVPSVSSINRIVRNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSS--------- 334
            :|.:|:  ..|||||||||:|.:|||:|       ...:...|...|:|.......         
 Worm    83 SEDVCT--TPPSVSSINRILRTRAAERA-------AEELQMILSAQHLARPRAQQVRLPPAFPFP 138

  Fly   335 -----TGTIGEP------------QPPTSNSSANSVNT-NVSASASVHASIPTSGTDSVQVSVGH 381
                 .|.:..|            .||..:..|..... ..|...||.:::..|..||.      
 Worm   139 FPLVWPGLLPNPAQLSLLLNSGALAPPVQSGGAGGPGVFGNSGQISVDSNLNLSEDDST------ 197

  Fly   382 INANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNNTESSCKRKRIEAHDE 446
            :.||:...:....|.||..:...:     .....:...|.....|...|..|:     ||:....
 Worm   198 LGANARRLSRSTFTNEQLQSLEEV-----FLRDPYPSPNERADLVKRTNLPEA-----RIQVWFS 252

  Fly   447 N-----HDTNIH-SDNDDGKRQRMST 466
            |     ..||.: ||.|:.:.:|..|
 Worm   253 NRRAKWRKTNANGSDRDELRAERSET 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 40/84 (48%)
eyg-1NP_496116.1 HTH <48..101 CDD:304362 35/54 (65%)
Homeobox 206..259 CDD:278475 10/62 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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